Factsheet for Zm00001d048141_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028085_P001	Maize	nucleus	76.9	82.09
KXG39918	Sorghum	nucleus	80.7	79.19
Os03t0205300-00	Rice	nucleus	49.68	46.04
HORVU4Hr1G069820.2	Barley	nucleus	47.15	45.29
TraesCS4D01G257100.1	Wheat	nucleus	46.84	44.71
TraesCS4A01G047700.1	Wheat	nucleus	46.52	44.68
TraesCS4B01G257200.1	Wheat	nucleus	46.52	44.41
Zm00001d021988_P001	Maize	nucleus	27.22	29.15
Zm00001d006733_P001	Maize	nucleus	26.27	29.02
Zm00001d048786_P001	Maize	nucleus, plastid	18.04	24.46
Zm00001d041351_P001	Maize	nucleus	23.42	24.34
Zm00001d008444_P001	Maize	nucleus	15.19	14.77
Zm00001d017804_P001	Maize	nucleus	13.61	14.58
Zm00001d020705_P001	Maize	nucleus	10.76	14.05
Zm00001d050016_P001	Maize	nucleus	10.44	13.69
Zm00001d031781_P001	Maize	nucleus	10.76	13.55
Zm00001d042988_P001	Maize	nucleus, plastid	8.54	12.8
Zm00001d042989_P001	Maize	nucleus, plastid	8.54	12.8
Zm00001d005841_P001	Maize	nucleus	9.18	11.98
Zm00001d049721_P001	Maize	nucleus	10.13	11.15
Zm00001d038863_P001	Maize	nucleus	13.29	10.61
Zm00001d035027_P001	Maize	nucleus	11.08	10.45
Zm00001d011187_P001	Maize	nucleus	11.39	8.37
Zm00001d044242_P001	Maize	nucleus	12.03	7.9
Zm00001d043699_P001	Maize	nucleus	10.44	7.82

Protein Annotations

EnsemblPlants:Zm00001d048141_P001	EnsemblPlants:Zm00001d048141_T001	EnsemblPlantsGene:Zm00001d048141	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005515	GO:GO:0046983	PANTHER:PTHR16223	PANTHER:PTHR16223:SF9	ProteinID:AQL08963.1
SEG:seg	UniParc:UPI000220EB60	UniProt:K7VKR4	MapMan:15.5.32	:	:

Description

Putative HLH DNA-binding domain superfamily protein

Coordinates

chr9:+:150725964..150727787

Molecular Weight (calculated)

34073.1 Da

IEP (calculated)

4.398

GRAVY (calculated)

-0.705

Length

316 amino acids

Sequence
(BLAST)

001: MESSEAGWHS FDPSVAVEDS EAMAQLLGVQ YSGNEQKQPT TPTAMAMCWP GQEADDQHYS SAAAYPYCTQ MQQPDPGASA SCYDYDYYYG SNTFTITGDF
101: FVPEEQVADP SFMLDLNLDF EYHQEGEGIG HGGGGNGETA PVCKRRQLED QKKGENTTCT VVPKKKSRST AVPAQKKGKK AHKGACSRGN QEESNGGDDG
201: NNNVAQPQQC SDNYYLSDDD SLEMTAACSN VSSASKKSSS SAAGGKARAG RGAATDPQSL YARVDISTML EEAAQYVKFL QLQIKLLSSD DMWMFAPIAY
301: NGVNVGLDLK ISPPQQ

Best Arabidopsis Sequence Match ( AT2G14760.1 )
(BLAST)

001: MEAMGEWSTG LGGIYTEEAD FMNQLLASYE QPCGGSSSET TATLTAYHHQ GSQWNGGFCF SQESSSYSGY CAAMPRQEED NNGMEDATIN TNLYLVGEET
101: SECDATEYSG KSLLPLETVA ENHDHSMLQP ENSLTTTTDE KMFNQCESSK KRTRATTTDK NKRANKARRS QKCVEMSGEN ENSGEEEYTE KAAGKRKTKP
201: LKPQKTCCSD DESNGGDTFL SKEDGEDSKA LNLNGKTRAS RGAATDPQSL YARKRRERIN ERLRILQHLV PNGTKVDIST MLEEAVQYVK FLQLQIKLLS
301: SDDLWMYAPI AYNGMDIGLD LKLNALTR

Arabidopsis Description

Basic helix-loop-helix (BHLH) DNA-binding superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IGG9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.