Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG33221 | Sorghum | nucleus | 78.2 | 78.95 |
| Os01t0707500-01 | Rice | nucleus | 58.29 | 62.6 |
| GSMUA_Achr1P14400_001 | Banana | nucleus | 23.46 | 59.28 |
| TraesCS3D01G252700.1 | Wheat | nucleus | 53.55 | 58.55 |
| TraesCS3B01G281600.1 | Wheat | nucleus | 52.61 | 58.42 |
| TraesCS3A01G252200.1 | Wheat | nucleus | 52.37 | 57.25 |
| HORVU3Hr1G066600.2 | Barley | nucleus | 54.74 | 57.04 |
| GSMUA_AchrUn_... | Banana | nucleus | 27.73 | 42.86 |
| Zm00001d038863_P001 | Maize | nucleus | 40.05 | 42.68 |
| Bra031275.1-P | Field mustard | nucleus | 26.3 | 33.43 |
| CDY51449 | Canola | nucleus | 26.3 | 33.43 |
| CDY32423 | Canola | nucleus | 26.07 | 33.33 |
| CDY62045 | Canola | nucleus | 26.3 | 33.13 |
| Bra001826.1-P | Field mustard | nucleus | 25.36 | 33.02 |
| CDY48884 | Canola | nucleus | 24.88 | 31.34 |
| Zm00001d011187_P001 | Maize | nucleus | 31.52 | 30.93 |
| Zm00001d050016_P001 | Maize | nucleus | 17.54 | 30.71 |
| Zm00001d005841_P001 | Maize | nucleus | 17.54 | 30.58 |
| PGSC0003DMT400006453 | Potato | nucleus | 27.73 | 30.31 |
| Zm00001d020705_P001 | Maize | nucleus | 17.06 | 29.75 |
| Solyc03g121240.1.1 | Tomato | nucleus | 26.78 | 29.74 |
| Zm00001d031781_P001 | Maize | nucleus | 17.3 | 29.08 |
| AT3G21330.1 | Thale cress | nucleus | 25.59 | 28.95 |
| Zm00001d044242_P001 | Maize | nucleus | 31.28 | 27.44 |
| KRH09982 | Soybean | nucleus | 28.67 | 27.19 |
| KRH47179 | Soybean | nucleus | 27.49 | 26.91 |
| KRH23349 | Soybean | nucleus | 28.67 | 26.89 |
| VIT_09s0002g02700.t01 | Wine grape | nucleus | 29.38 | 26.33 |
| KRH44227 | Soybean | nucleus | 27.25 | 25.96 |
| Zm00001d049721_P001 | Maize | nucleus | 17.06 | 25.09 |
| Zm00001d035027_P001 | Maize | nucleus | 17.06 | 21.49 |
| Zm00001d042988_P001 | Maize | nucleus, plastid | 10.43 | 20.85 |
| Zm00001d042989_P001 | Maize | nucleus, plastid | 10.43 | 20.85 |
| Zm00001d048786_P001 | Maize | nucleus, plastid | 9.24 | 16.74 |
| Zm00001d041351_P001 | Maize | nucleus | 11.85 | 16.45 |
| Zm00001d017804_P001 | Maize | nucleus | 10.66 | 15.25 |
| Zm00001d021988_P001 | Maize | nucleus | 10.43 | 14.92 |
| Zm00001d006733_P001 | Maize | nucleus | 9.48 | 13.99 |
| Zm00001d008444_P001 | Maize | nucleus | 9.72 | 12.62 |
| Zm00001d028085_P001 | Maize | nucleus | 7.58 | 10.81 |
| Zm00001d048141_P001 | Maize | cytosol | 7.82 | 10.44 |
Protein Annotations
| EnsemblPlants:Zm00001d043699_P001 | EnsemblPlants:Zm00001d043699_T001 | EnsemblPlantsGene:Zm00001d043699 | EntrezGene:103651274 | Gene3D:4.10.280.10 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 |
| InterPro:bHLH_dom | PANTHER:PTHR12565 | PANTHER:PTHR12565:SF288 | PFscan:PS50888 | ProteinID:ONM38853.1 | SEG:seg |
| SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI00022168A4 | UniProt:A0A096RT68 | MapMan:15.5.32 | : |
Description
Transcription factor bHLH87
Coordinates
chr3:+:207757834..207759102
Molecular Weight (calculated)
42349.1 Da
IEP (calculated)
6.508
GRAVY (calculated)
-0.230
Length
422 amino acids
Sequence
(BLAST)
(BLAST)
001: MDATFGCWAG AGHHVDEYLS RQAAGCGRLD MVDEAFLGAC FGQLQCDGAL TTAAGGVDAG ACQLVSSNAG AVQGGAGMDG DPLAFLSAGT GDVFDAGLLD
101: AALAFTRELG VGVVGDGGAA SNGALLSSYD SGTTGGNISS GESNNYSGGG GGHDAEVVSP TTAPPPPLTF THHASSNSQA QQAAHHAKRK VTDEYPATTT
201: TTTAAPPPAF PLPGGGGGAK RRAATSISFG GGHVPSCGAA AAGYEPDMEA MAQVKEMIYR AAAMRPVNLG PEAVGAAGAG AERPRRKNVR ISSDPQTVAA
301: RLRRERVSER LRVLQKLVPG GSKMDTASML DEAASYLKFL KSQVQALETL GTTTATNANS SASATTSRSS AASRSPQYNY YGGGGNNNNP AGFLGFSNVI
401: SPAGYVNPGG SSSNTGSNKL LF
101: AALAFTRELG VGVVGDGGAA SNGALLSSYD SGTTGGNISS GESNNYSGGG GGHDAEVVSP TTAPPPPLTF THHASSNSQA QQAAHHAKRK VTDEYPATTT
201: TTTAAPPPAF PLPGGGGGAK RRAATSISFG GGHVPSCGAA AAGYEPDMEA MAQVKEMIYR AAAMRPVNLG PEAVGAAGAG AERPRRKNVR ISSDPQTVAA
301: RLRRERVSER LRVLQKLVPG GSKMDTASML DEAASYLKFL KSQVQALETL GTTTATNANS SASATTSRSS AASRSPQYNY YGGGGNNNNP AGFLGFSNVI
401: SPAGYVNPGG SSSNTGSNKL LF
001: MEGLESVYAQ AMYGMTRESK IMEHQGSDLI WGGNELMARE LCSSSSYHHQ LINPNLSSCF MSDLGVLGEI QQQQHVGNRA SSIDPSSLDC LLSATSNSNN
101: TSTEDDEGIS VLFSDCQTLW SFGGVSSAES ENREITTETT TTIKPKPLKR NRGGDGGTTE TTTTTTKPKS LKRNRGDETG SHFSLVHPQD DSEKGGFKLI
201: YDENQSKSKK PRTEKERGGS SNISFQHSTC LSDNVEPDAE AIAQMKEMIY RAAAFRPVNF GLEIVEKPKR KNVKISTDPQ TVAARQRRER ISEKIRVLQT
301: LVPGGTKMDT ASMLDEAANY LKFLRAQVKA LENLRPKLDQ TNLSFSSAPT SFPLFHPSFL PLQNPNQIHH PEC
101: TSTEDDEGIS VLFSDCQTLW SFGGVSSAES ENREITTETT TTIKPKPLKR NRGGDGGTTE TTTTTTKPKS LKRNRGDETG SHFSLVHPQD DSEKGGFKLI
201: YDENQSKSKK PRTEKERGGS SNISFQHSTC LSDNVEPDAE AIAQMKEMIY RAAAFRPVNF GLEIVEKPKR KNVKISTDPQ TVAARQRRER ISEKIRVLQT
301: LVPGGTKMDT ASMLDEAANY LKFLRAQVKA LENLRPKLDQ TNLSFSSAPT SFPLFHPSFL PLQNPNQIHH PEC
Arabidopsis Description
BHLH87Transcription factor bHLH87 [Source:UniProtKB/Swiss-Prot;Acc:Q8S3D2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.