Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES17296 | Sorghum | nucleus | 41.12 | 39.56 |
| TraesCS5A01G067600.1 | Wheat | nucleus | 36.51 | 38.28 |
| TraesCS5D01G078800.1 | Wheat | nucleus | 36.18 | 38.06 |
| TraesCS5B01G074500.1 | Wheat | nucleus | 35.2 | 36.9 |
| Zm00001d048786_P001 | Maize | nucleus, plastid | 25.66 | 33.48 |
| Os12t0589000-00 | Rice | nucleus | 32.24 | 32.24 |
| HORVU5Hr1G018100.1 | Barley | cytosol, mitochondrion, nucleus | 30.92 | 30.13 |
| PGSC0003DMT400030165 | Potato | nucleus | 17.76 | 29.67 |
| Zm00001d006733_P001 | Maize | nucleus | 26.97 | 28.67 |
| Zm00001d021988_P001 | Maize | nucleus | 26.32 | 27.12 |
| Solyc04g077960.1.1 | Tomato | nucleus | 29.28 | 25.07 |
| Zm00001d028085_P001 | Maize | nucleus | 24.34 | 25.0 |
| PGSC0003DMT400055446 | Potato | nucleus | 28.62 | 24.1 |
| Solyc12g088380.1.1 | Tomato | nucleus | 21.38 | 23.47 |
| Zm00001d048141_P001 | Maize | cytosol | 24.34 | 23.42 |
| Zm00001d020705_P001 | Maize | nucleus | 15.79 | 19.83 |
| Zm00001d050016_P001 | Maize | nucleus | 14.47 | 18.26 |
| Zm00001d017804_P001 | Maize | nucleus | 17.43 | 17.97 |
| Zm00001d031781_P001 | Maize | nucleus | 14.8 | 17.93 |
| Zm00001d005841_P001 | Maize | nucleus | 14.14 | 17.77 |
| Zm00001d008444_P001 | Maize | nucleus | 17.76 | 16.62 |
| Zm00001d042988_P001 | Maize | nucleus, plastid | 10.86 | 15.64 |
| Zm00001d042989_P001 | Maize | nucleus, plastid | 10.86 | 15.64 |
| Zm00001d049721_P001 | Maize | nucleus | 11.84 | 12.54 |
| Zm00001d038863_P001 | Maize | nucleus | 16.12 | 12.37 |
| Zm00001d011187_P001 | Maize | nucleus | 16.78 | 11.86 |
| Zm00001d043699_P001 | Maize | nucleus | 16.45 | 11.85 |
| Zm00001d035027_P001 | Maize | nucleus | 12.5 | 11.34 |
| Zm00001d044242_P001 | Maize | nucleus | 14.47 | 9.15 |
Protein Annotations
| EnsemblPlants:Zm00001d041351_P001 | EnsemblPlants:Zm00001d041351_T001 | EnsemblPlantsGene:Zm00001d041351 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom |
| PANTHER:PTHR16223 | PANTHER:PTHR16223:SF61 | PFAM:PF00010 | PFscan:PS50888 | ProteinID:ONM32843.1 | SEG:seg |
| SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0002218B5F | UniProt:A0A1D6MVK7 | MapMan:15.5.32 | : |
Description
bHLH-transcription factor 58Transcription factor bHLH54
Coordinates
chr3:-:113913411..113915053
Molecular Weight (calculated)
31945.8 Da
IEP (calculated)
4.450
GRAVY (calculated)
-0.505
Length
304 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDGGLVSEA GAWAELGTGG DESEELVAQL LGAFFRSHGE EGRHQLLWSD DQASSDDVHG DGSLAVPLAY DGCCGYLSYS GSNSDELPLG SSSRAAPAGG
101: PPEELLGAAE TEYLNNVAAA DHPFFKWCGN GEGLDGPTSV VGTLGLGSGR KRARKKSGDE DEDPSTAIAS GSGPTSCCTT SDSDSNASPL ESADAGARRP
201: KGNENARAAG RGAAAATTTT AEPQSIYARK RRERINERLK VLQSLVPNGT KVDMSTMLEE AVHYVKFLQL QIRLLSSDDT WMYAPIAYNG MGIGIDLRMH
301: GQDR
101: PPEELLGAAE TEYLNNVAAA DHPFFKWCGN GEGLDGPTSV VGTLGLGSGR KRARKKSGDE DEDPSTAIAS GSGPTSCCTT SDSDSNASPL ESADAGARRP
201: KGNENARAAG RGAAAATTTT AEPQSIYARK RRERINERLK VLQSLVPNGT KVDMSTMLEE AVHYVKFLQL QIRLLSSDDT WMYAPIAYNG MGIGIDLRMH
301: GQDR
001: MEAMGEWSTG LGGIYTEEAD FMNQLLASYE QPCGGSSSET TATLTAYHHQ GSQWNGGFCF SQESSSYSGY CAAMPRQEED NNGMEDATIN TNLYLVGEET
101: SECDATEYSG KSLLPLETVA ENHDHSMLQP ENSLTTTTDE KMFNQCESSK KRTRATTTDK NKRANKARRS QKCVEMSGEN ENSGEEEYTE KAAGKRKTKP
201: LKPQKTCCSD DESNGGDTFL SKEDGEDSKA LNLNGKTRAS RGAATDPQSL YARKRRERIN ERLRILQHLV PNGTKVDIST MLEEAVQYVK FLQLQIKLLS
301: SDDLWMYAPI AYNGMDIGLD LKLNALTR
101: SECDATEYSG KSLLPLETVA ENHDHSMLQP ENSLTTTTDE KMFNQCESSK KRTRATTTDK NKRANKARRS QKCVEMSGEN ENSGEEEYTE KAAGKRKTKP
201: LKPQKTCCSD DESNGGDTFL SKEDGEDSKA LNLNGKTRAS RGAATDPQSL YARKRRERIN ERLRILQHLV PNGTKVDIST MLEEAVQYVK FLQLQIKLLS
301: SDDLWMYAPI AYNGMDIGLD LKLNALTR
Arabidopsis Description
Basic helix-loop-helix (BHLH) DNA-binding superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IGG9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.