Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER99632 | Sorghum | nucleus | 80.34 | 84.04 |
| Zm00001d006733_P001 | Maize | nucleus | 78.64 | 81.12 |
| Os07t0588400-00 | Rice | nucleus | 71.19 | 71.19 |
| PGSC0003DMT400008370 | Potato | nucleus | 31.53 | 46.97 |
| Solyc10g049720.1.1 | Tomato | nucleus | 37.29 | 36.91 |
| Solyc10g049780.1.1 | Tomato | nucleus | 33.9 | 36.76 |
| PGSC0003DMT400089728 | Potato | nucleus | 37.97 | 36.72 |
| Solyc01g107140.1.1 | Tomato | nucleus | 38.31 | 34.24 |
| PGSC0003DMT400087143 | Potato | nucleus | 38.31 | 33.93 |
| GSMUA_Achr2P17130_001 | Banana | nucleus | 36.27 | 33.86 |
| VIT_03s0091g00730.t01 | Wine grape | nucleus | 38.31 | 32.29 |
| Bra034587.1-P | Field mustard | nucleus | 37.29 | 31.79 |
| Bra036969.1-P | Field mustard | nucleus | 37.29 | 31.43 |
| Bra011476.1-P | Field mustard | nucleus | 36.61 | 31.12 |
| AT4G33880.1 | Thale cress | nucleus | 36.95 | 30.97 |
| KRG91108 | Soybean | nucleus | 36.95 | 30.88 |
| KRH15444 | Soybean | nucleus | 36.61 | 30.86 |
| KRH35669 | Soybean | nucleus | 37.29 | 30.73 |
| KRH35668 | Soybean | nucleus | 36.61 | 30.68 |
| KRH05600 | Soybean | nucleus | 36.27 | 30.31 |
| AT2G14760.3 | Thale cress | nucleus | 34.92 | 30.21 |
| KRG91107 | Soybean | nucleus | 36.27 | 29.89 |
| Zm00001d048786_P001 | Maize | nucleus, plastid | 23.05 | 29.18 |
| Bra039819.1-P | Field mustard | nucleus | 33.22 | 28.32 |
| Zm00001d028085_P001 | Maize | nucleus | 27.46 | 27.36 |
| Zm00001d048141_P001 | Maize | cytosol | 29.15 | 27.22 |
| Zm00001d041351_P001 | Maize | nucleus | 27.12 | 26.32 |
| CDY48431 | Canola | nucleus | 26.1 | 23.99 |
| Zm00001d017804_P001 | Maize | nucleus | 20.0 | 20.0 |
| Zm00001d008444_P001 | Maize | nucleus | 21.36 | 19.38 |
| Zm00001d050016_P001 | Maize | nucleus | 14.92 | 18.26 |
| Zm00001d020705_P001 | Maize | nucleus | 14.24 | 17.36 |
| Zm00001d031781_P001 | Maize | nucleus | 14.58 | 17.13 |
| Zm00001d042988_P001 | Maize | nucleus, plastid | 12.2 | 17.06 |
| Zm00001d042989_P001 | Maize | nucleus, plastid | 12.2 | 17.06 |
| Zm00001d005841_P001 | Maize | nucleus | 13.56 | 16.53 |
| Zm00001d049721_P001 | Maize | nucleus | 13.22 | 13.59 |
| Zm00001d035027_P001 | Maize | nucleus | 14.58 | 12.84 |
| Zm00001d038863_P001 | Maize | nucleus | 15.93 | 11.87 |
| Zm00001d011187_P001 | Maize | nucleus | 15.59 | 10.7 |
| Zm00001d043699_P001 | Maize | nucleus | 14.92 | 10.43 |
| Zm00001d044242_P001 | Maize | nucleus | 15.25 | 9.36 |
Protein Annotations
| EnsemblPlants:Zm00001d021988_P001 | EnsemblPlants:Zm00001d021988_T001 | EnsemblPlantsGene:Zm00001d021988 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom |
| PANTHER:PTHR16223 | PANTHER:PTHR16223:SF99 | PFAM:PF00010 | PFscan:PS50888 | ProteinID:ONM59221.1 | SEG:seg |
| SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0008456ECC | UniProt:A0A1D6IIA8 | MapMan:15.5.32 | : |
Description
bHLH-transcription factor 15Transcription factor bHLH85
Coordinates
chr7:-:167558259..167560016
Molecular Weight (calculated)
32342.6 Da
IEP (calculated)
4.428
GRAVY (calculated)
-0.525
Length
295 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSSALPMEI DMMAQFLGAD DDHCFTYDYE HDVDESMEAI AALLLPTLDT DSNSSSSCFN DDVPPQCWPQ PGHSSSVTTL LGPAESFEFP VMDLSFPTSD
101: FDPQSHCATP YLTEDLGSLQ HGKHSPVMEE EAADVEPAAK KRKASATATA TAKGSKKSRK ASKKDCIVDD DDVYVDPQSS GSCTSEEGNF EGNTYSSAKK
201: TCTRASRGGA TDPQSLYARK RRERINERLR ILQNLVPNGT KVDISTMLEE AAQYVKFLQL QIKLLSSDDM WMYAPIAYNG INISNVDLNI PALQK
101: FDPQSHCATP YLTEDLGSLQ HGKHSPVMEE EAADVEPAAK KRKASATATA TAKGSKKSRK ASKKDCIVDD DDVYVDPQSS GSCTSEEGNF EGNTYSSAKK
201: TCTRASRGGA TDPQSLYARK RRERINERLR ILQNLVPNGT KVDISTMLEE AAQYVKFLQL QIKLLSSDDM WMYAPIAYNG INISNVDLNI PALQK
001: MEAMGEWSTG LGGIYTEEAD FMNQLLASYE QPCGGSSSET TATLTAYHHQ GSQWNGGFCF SQESSSYSGY CAAMPRQEED NNGMEDATIN TNLYLVGEET
101: SECDATEYSG KSLLPLETVA ENHDHSMLQP ENSLTTTTDE KMFNQCESSK KRTRATTTDK NKRANKARRS QKCVEMSGEN ENSGEEEYTE KAAGKRKTKP
201: LKPQKTCCSD DESNGGDTFL SKEDGEDSKA LNLNGKTRAS RGAATDPQSL YARKRRERIN ERLRILQHLV PNGTKVDIST MLEEAVQYVK FLQLQIKLLS
301: SDDLWMYAPI AYNGMDIGLD LKLNALTR
101: SECDATEYSG KSLLPLETVA ENHDHSMLQP ENSLTTTTDE KMFNQCESSK KRTRATTTDK NKRANKARRS QKCVEMSGEN ENSGEEEYTE KAAGKRKTKP
201: LKPQKTCCSD DESNGGDTFL SKEDGEDSKA LNLNGKTRAS RGAATDPQSL YARKRRERIN ERLRILQHLV PNGTKVDIST MLEEAVQYVK FLQLQIKLLS
301: SDDLWMYAPI AYNGMDIGLD LKLNALTR
Arabidopsis Description
Basic helix-loop-helix (BHLH) DNA-binding superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IGG9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.