Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY48884 | Canola | nucleus | 94.14 | 91.04 |
| Bra031275.1-P | Field mustard | nucleus | 80.25 | 78.31 |
| AT3G21330.1 | Thale cress | nucleus | 87.65 | 76.14 |
| GSMUA_Achr1P14400_001 | Banana | nucleus | 24.38 | 47.31 |
| KRH47179 | Soybean | nucleus | 50.62 | 38.05 |
| Solyc03g121240.1.1 | Tomato | nucleus | 44.14 | 37.63 |
| KRH23349 | Soybean | nucleus | 52.16 | 37.56 |
| KRH09982 | Soybean | nucleus | 51.54 | 37.53 |
| GSMUA_AchrUn_... | Banana | nucleus | 31.48 | 37.36 |
| PGSC0003DMT400006453 | Potato | nucleus | 44.14 | 37.05 |
| KRH44227 | Soybean | nucleus | 50.0 | 36.57 |
| VIT_09s0002g02700.t01 | Wine grape | nucleus | 51.85 | 35.67 |
| Bra000979.1-P | Field mustard | cytosol | 19.44 | 34.05 |
| Bra036071.1-P | Field mustard | nucleus | 22.22 | 33.8 |
| Bra037128.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 20.06 | 31.71 |
| GSMUA_Achr8P24970_001 | Banana | nucleus | 33.95 | 31.61 |
| Bra030002.1-P | Field mustard | nucleus | 22.22 | 31.3 |
| Bra028620.1-P | Field mustard | nucleus | 20.37 | 30.84 |
| Bra012128.1-P | Field mustard | nucleus | 20.06 | 29.68 |
| GSMUA_Achr3P25950_001 | Banana | nucleus | 32.1 | 29.55 |
| Bra036801.1-P | Field mustard | nucleus | 20.37 | 28.57 |
| Os01t0707500-01 | Rice | nucleus | 32.41 | 26.72 |
| KXG33221 | Sorghum | nucleus | 34.26 | 26.55 |
| TraesCS3B01G281600.1 | Wheat | nucleus | 30.86 | 26.32 |
| TraesCS3D01G252700.1 | Wheat | nucleus | 31.17 | 26.17 |
| TraesCS3A01G252200.1 | Wheat | nucleus | 30.86 | 25.91 |
| EES18589 | Sorghum | nucleus | 31.79 | 25.69 |
| Zm00001d043699_P001 | Maize | nucleus | 33.02 | 25.36 |
| Zm00001d038863_P001 | Maize | nucleus | 30.86 | 25.25 |
| HORVU3Hr1G066600.2 | Barley | nucleus | 31.17 | 24.94 |
| Bra028895.1-P | Field mustard | nucleus, plastid | 13.27 | 24.29 |
| Os05t0541400-00 | Rice | nucleus | 31.17 | 24.28 |
| TraesCS1A01G362800.1 | Wheat | nucleus | 29.32 | 24.05 |
| TraesCS1B01G380000.1 | Wheat | nucleus | 29.32 | 23.87 |
| HORVU1Hr1G079450.1 | Barley | nucleus | 29.32 | 23.75 |
| Zm00001d011187_P001 | Maize | nucleus | 31.48 | 23.72 |
| TraesCS1D01G367700.1 | Wheat | nucleus | 29.32 | 23.69 |
| Os01t0566800-00 | Rice | nucleus | 31.48 | 21.89 |
| TraesCS3A01G207300.2 | Wheat | extracellular | 31.17 | 21.63 |
| Zm00001d044242_P001 | Maize | nucleus | 31.79 | 21.41 |
| HORVU3Hr1G048770.1 | Barley | plastid | 31.79 | 21.37 |
| TraesCS3D01G208500.2 | Wheat | mitochondrion | 31.17 | 21.31 |
| TraesCS3B01G233700.2 | Wheat | extracellular, mitochondrion, nucleus, plastid | 30.25 | 20.9 |
| OQU87026 | Sorghum | nucleus | 26.85 | 18.87 |
| Bra030063.1-P | Field mustard | nucleus | 13.58 | 17.25 |
| Bra032846.1-P | Field mustard | nucleus | 12.65 | 16.8 |
| Bra010921.1-P | Field mustard | nucleus | 12.35 | 15.62 |
| Bra011476.1-P | Field mustard | nucleus | 15.74 | 14.7 |
| Bra034587.1-P | Field mustard | nucleus | 15.43 | 14.45 |
| Bra036969.1-P | Field mustard | nucleus | 15.43 | 14.29 |
| Bra019708.1-P | Field mustard | nucleus | 13.27 | 14.01 |
| Bra039819.1-P | Field mustard | nucleus | 14.81 | 13.87 |
| Bra004169.1-P | Field mustard | nucleus | 10.49 | 12.69 |
Protein Annotations
| EnsemblPlants:Bra001826.1 | EnsemblPlants:Bra001826.1-P | EnsemblPlantsGene:Bra001826 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom |
| ncoils:Coil | PANTHER:PTHR12565 | PANTHER:PTHR12565:SF293 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg |
| SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI000254063B | UniProt:M4CC96 | MapMan:15.5.32 | : |
Description
AT3G21330 (E=1e-086) | basic helix-loop-helix (bHLH) family protein
Coordinates
chrA03:+:18687479..18688453
Molecular Weight (calculated)
36225.2 Da
IEP (calculated)
6.440
GRAVY (calculated)
-0.756
Length
324 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGLEAIYGM TRESKIMEHQ GSDLIWGGNE LSSCFISDLG IIGETQHHQH VGNRDSSIDP SSIDCLLSAT TNSNNTSIQN DEGISELFSD CQTLWSFGGV
101: SSAESENREI TTTKAKSFKR NRGNRDETGS HFCLAGHPQE ESEKGNFKLI YDENQSKSKK PRTEKDRDGS SNISFRQHST SLSDNVEPDA EAIAQMKEMI
201: YTAAAFRPVN LGLETVEKPK RKNVKISTDP QTVAARQRRE RVSEKIRVLQ NLVPGGTKMD TASMLDEAAN YLKFLRAQVK ALENLRPKLD PTNFSFSSPS
301: SFPLFHPSFI PFQNPNQVHH HQEC
101: SSAESENREI TTTKAKSFKR NRGNRDETGS HFCLAGHPQE ESEKGNFKLI YDENQSKSKK PRTEKDRDGS SNISFRQHST SLSDNVEPDA EAIAQMKEMI
201: YTAAAFRPVN LGLETVEKPK RKNVKISTDP QTVAARQRRE RVSEKIRVLQ NLVPGGTKMD TASMLDEAAN YLKFLRAQVK ALENLRPKLD PTNFSFSSPS
301: SFPLFHPSFI PFQNPNQVHH HQEC
001: MEGLESVYAQ AMYGMTRESK IMEHQGSDLI WGGNELMARE LCSSSSYHHQ LINPNLSSCF MSDLGVLGEI QQQQHVGNRA SSIDPSSLDC LLSATSNSNN
101: TSTEDDEGIS VLFSDCQTLW SFGGVSSAES ENREITTETT TTIKPKPLKR NRGGDGGTTE TTTTTTKPKS LKRNRGDETG SHFSLVHPQD DSEKGGFKLI
201: YDENQSKSKK PRTEKERGGS SNISFQHSTC LSDNVEPDAE AIAQMKEMIY RAAAFRPVNF GLEIVEKPKR KNVKISTDPQ TVAARQRRER ISEKIRVLQT
301: LVPGGTKMDT ASMLDEAANY LKFLRAQVKA LENLRPKLDQ TNLSFSSAPT SFPLFHPSFL PLQNPNQIHH PEC
101: TSTEDDEGIS VLFSDCQTLW SFGGVSSAES ENREITTETT TTIKPKPLKR NRGGDGGTTE TTTTTTKPKS LKRNRGDETG SHFSLVHPQD DSEKGGFKLI
201: YDENQSKSKK PRTEKERGGS SNISFQHSTC LSDNVEPDAE AIAQMKEMIY RAAAFRPVNF GLEIVEKPKR KNVKISTDPQ TVAARQRRER ISEKIRVLQT
301: LVPGGTKMDT ASMLDEAANY LKFLRAQVKA LENLRPKLDQ TNLSFSSAPT SFPLFHPSFL PLQNPNQIHH PEC
Arabidopsis Description
BHLH87Transcription factor bHLH87 [Source:UniProtKB/Swiss-Prot;Acc:Q8S3D2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.