Factsheet for Bra037128.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytoskeleton, nucleus, cytosol

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18636	Canola	nucleus	98.54	98.54
CDX81342	Canola	cytoskeleton, cytosol, nucleus	96.1	95.17
Bra012128.1-P	Field mustard	nucleus	82.93	77.63
Bra036801.1-P	Field mustard	nucleus	87.32	77.49
AT5G67060.1	Thale cress	nucleus	84.88	72.2
Solyc12g088790.1.1	Tomato	nucleus	40.49	68.59
Bra030002.1-P	Field mustard	nucleus	72.68	64.78
Bra036071.1-P	Field mustard	nucleus	66.83	64.32
PGSC0003DMT400048857	Potato	nucleus	39.51	54.73
KRH28464	Soybean	nucleus	54.15	45.87
PGSC0003DMT400010344	Potato	nucleus	49.27	45.09
KRH77007	Soybean	nucleus	53.66	43.82
TraesCS7D01G263400.1	Wheat	nucleus	46.34	43.18
HORVU7Hr1G054880.1	Barley	nucleus	46.34	42.79
TraesCS7A01G262600.1	Wheat	nucleus	45.85	42.73
TraesCS7B01G160500.1	Wheat	nucleus	45.37	42.08
KRH57944	Soybean	nucleus	50.24	40.55
Os09t0455300-01	Rice	nucleus	45.85	39.83
TraesCS5D01G244000.1	Wheat	nucleus	45.37	39.57
TraesCS5A01G237500.1	Wheat	nucleus	45.37	39.57
HORVU5Hr1G068110.1	Barley	nucleus	45.85	39.5
TraesCS6A01G142000.1	Wheat	nucleus	44.88	39.15
TraesCS5B01G235200.1	Wheat	nucleus	44.88	39.15
KRH04603	Soybean	nucleus	53.17	38.65
Zm00001d050016_P001	Maize	nucleus	44.88	38.17
Zm00001d020705_P001	Maize	nucleus	44.88	38.02
GSMUA_Achr9P15380_001	Banana	nucleus	44.39	37.14
EER96848	Sorghum	nucleus	45.85	36.02
Bra028620.1-P	Field mustard	nucleus	37.56	35.98
Zm00001d005841_P001	Maize	nucleus	42.44	35.95
Zm00001d031781_P001	Maize	nucleus	43.41	35.46
Bra000979.1-P	Field mustard	cytosol	31.71	35.14
EES15124	Sorghum	nucleus	45.85	34.94
Bra028895.1-P	Field mustard	nucleus, plastid	22.93	26.55
Bra031275.1-P	Field mustard	nucleus	34.15	21.08
Bra001826.1-P	Field mustard	nucleus	31.71	20.06
Bra032846.1-P	Field mustard	nucleus	21.46	18.03
Bra030063.1-P	Field mustard	nucleus	20.49	16.47
Bra010921.1-P	Field mustard	nucleus	20.49	16.41
Bra019708.1-P	Field mustard	nucleus	21.95	14.66
Bra034587.1-P	Field mustard	nucleus	22.93	13.58
Bra036969.1-P	Field mustard	nucleus	21.46	12.57
Bra011476.1-P	Field mustard	nucleus	20.98	12.39
Bra004169.1-P	Field mustard	nucleus	15.61	11.94
Bra039819.1-P	Field mustard	nucleus	19.51	11.56

Protein Annotations

EnsemblPlants:Bra037128.1	EnsemblPlants:Bra037128.1-P	EnsemblPlantsGene:Bra037128	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom
ncoils:Coil	PANTHER:PTHR12565	PANTHER:PTHR12565:SF74	PFAM:PF00010	PFscan:PS50888	SEG:seg
SMART:SM00353	SUPFAM:SSF47459	UniParc:UPI0002541D23	UniProt:M4F7R7	MapMan:15.5.32	:

Description

AT5G67060 (E=1e-067) HEC1 | HEC1 (HECATE 1); transcription factor

Coordinates

chrA09:+:4345076..4345693

Molecular Weight (calculated)

23289.2 Da

IEP (calculated)

9.774

GRAVY (calculated)

-0.562

Length

205 amino acids

Sequence
(BLAST)

001: MDSDIMNMMM QHMENLPEFC NTNPSLIDHN NNTYPFLFNS NHNHSDSMTH EPGFRYGSGL HASPAYSAIL HDKRHNISNT DNMAAMREMI FRIAMMQPIH
101: IDPEAVKPPK RRNVRISKDP QSVAARHRRE RISERIRILQ RLVPGGTKMD TASMLDEAIH YVKFLKKQVQ SLEEQAVVNG GGVVMKGCGS MGTTHQMVGK
201: AHILR

Best Arabidopsis Sequence Match ( AT5G67060.1 )
(BLAST)

001: MDSDIMNMMM HQMEKLPEFC NPNSSFFSPD HNNTYPFLFN STHYQSDHSM TNEPGFRYGS GLLTNPSSIS PNTAYSSVFL DKRNNSNNNN NGTNMAAMRE
101: MIFRIAVMQP IHIDPEAVKP PKRRNVRISK DPQSVAARHR RERISERIRI LQRLVPGGTK MDTASMLDEA IHYVKFLKKQ VQSLEEQAVV TGGGGGGGGR
201: VLIGGGGMTA ASGGGGGGGV VMKGCGTVGT HQMVGNAQIL R

Arabidopsis Description

HEC1HEC1 [Source:UniProtKB/TrEMBL;Acc:A0A178UR10]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.