Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d043699_P001 | Maize | nucleus | 78.95 | 78.2 |
| Os01t0707500-01 | Rice | nucleus | 62.68 | 66.67 |
| TraesCS3D01G252700.1 | Wheat | nucleus | 56.46 | 61.14 |
| GSMUA_Achr1P14400_001 | Banana | nucleus | 24.4 | 61.08 |
| TraesCS3B01G281600.1 | Wheat | nucleus | 55.26 | 60.79 |
| TraesCS3A01G252200.1 | Wheat | nucleus | 55.98 | 60.62 |
| HORVU3Hr1G066600.2 | Barley | nucleus | 58.13 | 60.0 |
| GSMUA_AchrUn_... | Banana | nucleus | 29.19 | 44.69 |
| EES18589 | Sorghum | nucleus | 42.82 | 44.64 |
| Bra031275.1-P | Field mustard | nucleus | 27.27 | 34.34 |
| CDY51449 | Canola | nucleus | 27.27 | 34.34 |
| Bra001826.1-P | Field mustard | nucleus | 26.55 | 34.26 |
| CDY32423 | Canola | nucleus | 27.03 | 34.24 |
| CDY62045 | Canola | nucleus | 27.27 | 34.03 |
| CDY48884 | Canola | nucleus | 25.84 | 32.24 |
| PGSC0003DMT400006453 | Potato | nucleus | 28.95 | 31.35 |
| Solyc03g121240.1.1 | Tomato | nucleus | 27.99 | 30.79 |
| AT3G21330.1 | Thale cress | nucleus | 26.55 | 29.76 |
| KRH09982 | Soybean | nucleus | 29.9 | 28.09 |
| KRH47179 | Soybean | nucleus | 28.95 | 28.07 |
| KRH23349 | Soybean | nucleus | 30.14 | 28.0 |
| EER96848 | Sorghum | nucleus | 17.46 | 27.97 |
| KRH44227 | Soybean | nucleus | 28.47 | 26.86 |
| EES15124 | Sorghum | nucleus | 17.22 | 26.77 |
| OQU87026 | Sorghum | nucleus | 28.95 | 26.25 |
| VIT_09s0002g02700.t01 | Wine grape | nucleus | 29.19 | 25.9 |
| EES14382 | Sorghum | nucleus | 17.22 | 20.69 |
| EER93400 | Sorghum | nucleus | 12.92 | 18.49 |
| OQU83893 | Sorghum | nucleus | 10.29 | 17.77 |
| EES17296 | Sorghum | nucleus | 13.16 | 17.41 |
| EES07381 | Sorghum | nucleus | 12.44 | 16.99 |
| EER99632 | Sorghum | nucleus | 11.24 | 16.67 |
| EER91225 | Sorghum | nucleus | 11.72 | 16.33 |
| KXG39918 | Sorghum | nucleus | 11.48 | 14.91 |
| EES00435 | Sorghum | nucleus | 10.29 | 14.83 |
| OQU87789 | Sorghum | cytosol | 4.55 | 13.29 |
Protein Annotations
| EnsemblPlants:KXG33221 | EnsemblPlantsGene:SORBI_3003G273200 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom | PANTHER:PTHR12565 |
| PANTHER:PTHR12565:SF288 | PFscan:PS50888 | ProteinID:KXG33221 | ProteinID:KXG33221.1 | ProteinID:KXG33222.1 | SEG:seg |
| SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0003C72E0C | UniProt:A0A1B6Q5M6 | MapMan:15.5.32 | : |
Description
hypothetical protein
Coordinates
chr3:-:60921993..60925068
Molecular Weight (calculated)
42660.6 Da
IEP (calculated)
6.715
GRAVY (calculated)
-0.253
Length
418 amino acids
Sequence
(BLAST)
(BLAST)
001: MDATFGWAGA GHHVDEYFSR QAAAGCSRFD MDEAFLGVCF GQLQCDGALI GGGGGDAGAC QVSSNACAIE GGGAGMDGDP LAFLSAGTGD VFDAGLLDAA
101: LAFTRELGYG GAVSNGGAML SSYSGTTGGN ISSGESNNYS GGGGGGHDAE VVSPTSIMSQ TTTAPPPLTF THASSHSQQA AHGHRVKRKV DVSDEFPATA
201: IATTTTTAPP PAPFPRPAGG GAKRRAAATS ISFGGGAHVA RDPSAGYEPD MEAMAQVKEM IYRAAAMRPV NLGPEVIAAA AAEKPRRKNV RISSDPQTVA
301: ARLRRERVSE RLRVLQKLVP GGSKMDTASM LDEAASYLKF LKSQVQALET LGTTNDTSTS NSTATASRSQ QYNYYSSGSN NPGGFLGFAA GRSSNMISPA
401: GYVNPTIGSS NTSSKLLL
101: LAFTRELGYG GAVSNGGAML SSYSGTTGGN ISSGESNNYS GGGGGGHDAE VVSPTSIMSQ TTTAPPPLTF THASSHSQQA AHGHRVKRKV DVSDEFPATA
201: IATTTTTAPP PAPFPRPAGG GAKRRAAATS ISFGGGAHVA RDPSAGYEPD MEAMAQVKEM IYRAAAMRPV NLGPEVIAAA AAEKPRRKNV RISSDPQTVA
301: ARLRRERVSE RLRVLQKLVP GGSKMDTASM LDEAASYLKF LKSQVQALET LGTTNDTSTS NSTATASRSQ QYNYYSSGSN NPGGFLGFAA GRSSNMISPA
401: GYVNPTIGSS NTSSKLLL
001: MEGLESVYAQ AMYGMTRESK IMEHQGSDLI WGGNELMARE LCSSSSYHHQ LINPNLSSCF MSDLGVLGEI QQQQHVGNRA SSIDPSSLDC LLSATSNSNN
101: TSTEDDEGIS VLFSDCQTLW SFGGVSSAES ENREITTETT TTIKPKPLKR NRGGDGGTTE TTTTTTKPKS LKRNRGDETG SHFSLVHPQD DSEKGGFKLI
201: YDENQSKSKK PRTEKERGGS SNISFQHSTC LSDNVEPDAE AIAQMKEMIY RAAAFRPVNF GLEIVEKPKR KNVKISTDPQ TVAARQRRER ISEKIRVLQT
301: LVPGGTKMDT ASMLDEAANY LKFLRAQVKA LENLRPKLDQ TNLSFSSAPT SFPLFHPSFL PLQNPNQIHH PEC
101: TSTEDDEGIS VLFSDCQTLW SFGGVSSAES ENREITTETT TTIKPKPLKR NRGGDGGTTE TTTTTTKPKS LKRNRGDETG SHFSLVHPQD DSEKGGFKLI
201: YDENQSKSKK PRTEKERGGS SNISFQHSTC LSDNVEPDAE AIAQMKEMIY RAAAFRPVNF GLEIVEKPKR KNVKISTDPQ TVAARQRRER ISEKIRVLQT
301: LVPGGTKMDT ASMLDEAANY LKFLRAQVKA LENLRPKLDQ TNLSFSSAPT SFPLFHPSFL PLQNPNQIHH PEC
Arabidopsis Description
BHLH87Transcription factor bHLH87 [Source:UniProtKB/Swiss-Prot;Acc:Q8S3D2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.