Factsheet for HORVU4Hr1G069820.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G257100.1	Wheat	nucleus	95.44	94.86
TraesCS4A01G047700.1	Wheat	nucleus	94.53	94.53
TraesCS4B01G257200.1	Wheat	nucleus	94.83	94.26
Os03t0205300-00	Rice	nucleus	70.21	67.74
HORVU1Hr1G043780.1	Barley	mitochondrion, nucleus	12.16	66.67
KXG39918	Sorghum	nucleus	53.5	54.66
Zm00001d028085_P001	Maize	nucleus	44.98	50.0
Zm00001d048141_P001	Maize	cytosol	45.29	47.15
HORVU2Hr1G035190.9	Barley	nucleus	32.52	35.79
HORVU5Hr1G097520.1	Barley	nucleus	28.27	31.85
HORVU5Hr1G018100.1	Barley	cytosol, mitochondrion, nucleus	27.96	29.49
HORVU7Hr1G054880.1	Barley	nucleus	12.77	18.92
HORVU5Hr1G068110.1	Barley	nucleus	13.07	18.07
HORVU0Hr1G019640.1	Barley	cytosol	9.73	17.2
HORVU7Hr1G046580.1	Barley	plasma membrane, vacuole	17.02	16.92
HORVU3Hr1G087710.1	Barley	nucleus	10.64	16.67
HORVU7Hr1G077270.3	Barley	cytosol	13.07	12.68
HORVU1Hr1G079450.1	Barley	nucleus	14.29	11.75
HORVU3Hr1G066600.2	Barley	nucleus	13.98	11.36
HORVU6Hr1G069690.3	Barley	cytosol	10.33	10.09
HORVU3Hr1G048770.1	Barley	plastid	13.98	9.54

Protein Annotations

EnsemblPlants:HORVU4Hr1G069820.2	EnsemblPlantsGene:HORVU4Hr1G069820	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom	PANTHER:PTHR16223
PANTHER:PTHR16223:SF9	PFAM:PF00010	PFscan:PS50888	SEG:seg	SMART:SM00353	SUPFAM:SSF47459
UniParc:UPI0002957914	UniProt:M0YAS8	MapMan:15.5.32	:	:	:

Description

No Description!

Coordinates

chrchr4H:+:572900470..572901926

Molecular Weight (calculated)

35639.3 Da

IEP (calculated)

6.049

GRAVY (calculated)

-0.719

Length

329 amino acids

Sequence
(BLAST)

001: MESSEASWHS FDPSVAVEDS EEMARLLGVQ FFGNEQKQHP AAVPPSSMYW PGQEAADQYY TSAPYYMQMQ EHASAGAGYH SHGYYDGGAM AGDFFVAPEE
101: QIMADPAGFM VDLNLQFDDQ DDGAGTSAAA CKRKFGDQNG TQSDTVAAPK KKARSTAPPV QRKGKSSAQP KKAPKGSCSR GAHEESNGEA NNNNVPSSSN
201: YLSDEEGSLE MTSCSNMSSA SKKTSSSRGD HGGGAKARAG RGAATDPQSL YARQKRREKI NERLKVLQHL IPNGTKVDIS TMLEEAVHYI KFMQLQIKLL
301: SSDDMWMFAP IAYNGFNVGL DLKIAPPQQ

Best Arabidopsis Sequence Match ( AT2G14760.1 )
(BLAST)

001: MEAMGEWSTG LGGIYTEEAD FMNQLLASYE QPCGGSSSET TATLTAYHHQ GSQWNGGFCF SQESSSYSGY CAAMPRQEED NNGMEDATIN TNLYLVGEET
101: SECDATEYSG KSLLPLETVA ENHDHSMLQP ENSLTTTTDE KMFNQCESSK KRTRATTTDK NKRANKARRS QKCVEMSGEN ENSGEEEYTE KAAGKRKTKP
201: LKPQKTCCSD DESNGGDTFL SKEDGEDSKA LNLNGKTRAS RGAATDPQSL YARKRRERIN ERLRILQHLV PNGTKVDIST MLEEAVQYVK FLQLQIKLLS
301: SDDLWMYAPI AYNGMDIGLD LKLNALTR

Arabidopsis Description

Basic helix-loop-helix (BHLH) DNA-binding superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IGG9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.