Factsheet for HORVU5Hr1G097520.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 2
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
TargetP:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G043780.1	Barley	mitochondrion, nucleus	18.15	88.33
TraesCS5B01G406100.1	Wheat	nucleus	78.77	83.64
TraesCS5A01G401300.1	Wheat	nucleus	73.97	74.74
TraesCS5D01G411600.1	Wheat	nucleus	75.0	73.0
GSMUA_Achr4P23240_001	Banana	nucleus	23.29	46.58
EER93400	Sorghum	nucleus	36.3	36.3
CDY15706	Canola	nucleus	25.68	35.38
CDX90106	Canola	nucleus	25.68	35.21
CDY03948	Canola	cytosol	17.12	34.48
CDY27630	Canola	nucleus	27.05	32.64
Bra032846.1-P	Field mustard	nucleus	27.05	32.38
Bra030063.1-P	Field mustard	nucleus	28.08	32.16
CDY11768	Canola	nucleus	28.08	32.03
CDX84906	Canola	nucleus	26.71	31.97
Bra010921.1-P	Field mustard	nucleus	27.74	31.64
AT5G43175.1	Thale cress	nucleus	23.97	31.39
GSMUA_Achr9P09600_001	Banana	nucleus	29.45	31.16
AT1G27740.1	Thale cress	nucleus	27.4	31.01
HORVU2Hr1G035190.9	Barley	nucleus	31.51	30.77
CDY11802	Canola	nucleus	22.95	29.13
HORVU4Hr1G069820.2	Barley	nucleus	31.85	28.27
HORVU5Hr1G018100.1	Barley	cytosol, mitochondrion, nucleus	27.05	25.32
HORVU3Hr1G087710.1	Barley	nucleus	13.01	18.1
HORVU0Hr1G019640.1	Barley	cytosol	11.3	17.74
HORVU7Hr1G054880.1	Barley	nucleus	13.01	17.12
HORVU5Hr1G068110.1	Barley	nucleus	13.7	16.81
HORVU7Hr1G046580.1	Barley	plasma membrane, vacuole	18.15	16.01
HORVU7Hr1G077270.3	Barley	cytosol	14.38	12.39
HORVU3Hr1G066600.2	Barley	nucleus	16.1	11.6
HORVU1Hr1G079450.1	Barley	nucleus	15.07	11.0
CDY03946	Canola	nucleus	10.27	10.91
HORVU6Hr1G069690.3	Barley	cytosol	11.99	10.39
HORVU3Hr1G048770.1	Barley	plastid	14.04	8.51

Protein Annotations

EnsemblPlants:HORVU5Hr1G097520.1	EnsemblPlantsGene:HORVU5Hr1G097520	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom	PANTHER:PTHR16223
PANTHER:PTHR16223:SF105	PFAM:PF00010	PFscan:PS50888	SEG:seg	SMART:SM00353	SUPFAM:SSF47459
UniParc:UPI000B4694DE	UniProt:A0A287SFK5	MapMan:15.5.32	:	:	:

Description

No Description!

Coordinates

chrchr5H:+:604615913..604618068

Molecular Weight (calculated)

31567.2 Da

IEP (calculated)

8.858

GRAVY (calculated)

-0.602

Length

292 amino acids

Sequence
(BLAST)

001: CSIASPYAAV QRRTIRLDRL DSTTNSLHNT MSRSHEAARW SPYHAPDEEE SEIVAQFLTA PYPCFDGGCC SYDFLGEPDV SLGINTLSYC GSGSSSSTID
101: LNLSREEGRI SKRATPSPAG LVQGGYRNGD GAATAKRKAG GDKGGDLGRH KKKARAADHK GGKPVTSKMA QQSSSYCSDK ESDCSQGNRG EEANVGVGCT
201: VKARAGRGPG SDPQSLYAKR RREKINDKLR VLQKLVPNGT KVDLSTMLEE AVLYVKFLQL QIKVLSSDEM WMYAPLAYSG MSLGIDMRIT PQ

Best Arabidopsis Sequence Match ( AT4G33880.1 )
(BLAST)

001: MEAMGEWSNN LGGMYTYATE EADFMNQLLA SYDHPGTGSS SGAAASGDHQ GLYWNLGSHH NHLSLVSEAG SFCFSQESSS YSAGNSGYYT VVPPTVEENQ
101: NETMDFGMED VTINTNSYLV GEETSECDVE KYSSGKTLMP LETVVENHDD EESLLQSEIS VTTTKSLTGS KKRSRATSTD KNKRARVNKR AQKNVEMSGD
201: NNEGEEEEGE TKLKKRKNGA MMSRQNSSTT FCTEEESNCA DQDGGGEDSS SKEDDPSKAL NLNGKTRASR GAATDPQSLY ARKRRERINE RLRILQNLVP
301: NGTKVDISTM LEEAVHYVKF LQLQIKLLSS DDLWMYAPIA FNGMDIGLSS PR

Arabidopsis Description

BHLH85Transcription factor bHLH85 [Source:UniProtKB/Swiss-Prot;Acc:Q84WK0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.