Factsheet for HORVU2Hr1G035190.9

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G193700.1	Wheat	nucleus	95.65	94.7
TraesCS2B01G212700.1	Wheat	nucleus	94.31	93.38
TraesCS2A01G194200.1	Wheat	nucleus	93.98	93.05
HORVU1Hr1G043780.1	Barley	mitochondrion, nucleus	11.71	58.33
PGSC0003DMT400030165	Potato	nucleus	24.75	40.66
HORVU4Hr1G069820.2	Barley	nucleus	35.79	32.52
Solyc12g088380.1.1	Tomato	nucleus	30.1	32.49
HORVU5Hr1G097520.1	Barley	nucleus	30.77	31.51
Solyc04g077960.1.1	Tomato	nucleus	35.79	30.14
PGSC0003DMT400055446	Potato	nucleus	36.12	29.92
HORVU5Hr1G018100.1	Barley	cytosol, mitochondrion, nucleus	29.1	27.88
HORVU7Hr1G054880.1	Barley	nucleus	14.72	19.82
HORVU0Hr1G019640.1	Barley	cytosol	12.04	19.35
HORVU5Hr1G068110.1	Barley	nucleus	14.05	17.65
HORVU3Hr1G087710.1	Barley	nucleus	12.37	17.62
HORVU7Hr1G046580.1	Barley	plasma membrane, vacuole	18.39	16.62
HORVU1Hr1G079450.1	Barley	nucleus	16.05	12.0
HORVU3Hr1G066600.2	Barley	nucleus	15.72	11.6
HORVU6Hr1G069690.3	Barley	cytosol	12.37	10.98
HORVU7Hr1G077270.3	Barley	cytosol	12.37	10.91
HORVU3Hr1G048770.1	Barley	plastid	15.38	9.54

Protein Annotations

EnsemblPlants:HORVU2Hr1G035190.9	EnsemblPlantsGene:HORVU2Hr1G035190	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom	PANTHER:PTHR16223
PANTHER:PTHR16223:SF61	PFAM:PF00010	PFscan:PS50888	SEG:seg	SMART:SM00353	SUPFAM:SSF47459
UniParc:UPI000B47EB0A	UniProt:A0A287HPC6	MapMan:15.5.32	:	:	:

Description

No Description!

Coordinates

chrchr2H:+:147158810..147160384

Molecular Weight (calculated)

32776.9 Da

IEP (calculated)

4.530

GRAVY (calculated)

-0.651

Length

299 amino acids

Sequence
(BLAST)

001: MESSYSSAMP METDMMSQFL EDSHHCFAYE QQDESMEAMA AMFLPALDTD SNSSSSCLNY DVSPQCWPQP QPGHSSSVTS FLDPAHGYES FEFPVVDPFP
101: HAEFQSHCTD IPYLGGEDLS PLDGNCVPAG GEEAANDHTP VTNKRKSRAA TTASKKAKKA GKKDFTGNDI EGDDTYAIDP QSSSSCTSED GDLDGNAKSS
201: SKKAGTRASR GAATDPQSLY ARQKRRERIN ERLKTLQNLV PNGTKVDIST MLEEAVEYVK FMQLQIKLLS SDDMWMYAPL AYNGMNVSSL EMHIAALQK

Best Arabidopsis Sequence Match ( AT4G33880.1 )
(BLAST)

001: MEAMGEWSNN LGGMYTYATE EADFMNQLLA SYDHPGTGSS SGAAASGDHQ GLYWNLGSHH NHLSLVSEAG SFCFSQESSS YSAGNSGYYT VVPPTVEENQ
101: NETMDFGMED VTINTNSYLV GEETSECDVE KYSSGKTLMP LETVVENHDD EESLLQSEIS VTTTKSLTGS KKRSRATSTD KNKRARVNKR AQKNVEMSGD
201: NNEGEEEEGE TKLKKRKNGA MMSRQNSSTT FCTEEESNCA DQDGGGEDSS SKEDDPSKAL NLNGKTRASR GAATDPQSLY ARKRRERINE RLRILQNLVP
301: NGTKVDISTM LEEAVHYVKF LQLQIKLLSS DDLWMYAPIA FNGMDIGLSS PR

Arabidopsis Description

BHLH85Transcription factor bHLH85 [Source:UniProtKB/Swiss-Prot;Acc:Q84WK0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.