Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH43543 | Soybean | nucleus | 92.11 | 90.41 |
| GSMUA_Achr6P18580_001 | Banana | cytosol | 33.46 | 72.95 |
| GSMUA_Achr7P23410_001 | Banana | endoplasmic reticulum, extracellular, vacuole | 36.84 | 58.33 |
| GSMUA_Achr5P01290_001 | Banana | nucleus | 40.6 | 54.55 |
| CDY64847 | Canola | nucleus | 42.86 | 53.02 |
| CDX85799 | Canola | nucleus | 42.48 | 52.8 |
| Bra028620.1-P | Field mustard | nucleus | 42.48 | 52.8 |
| AT5G09750.1 | Thale cress | nucleus | 43.61 | 51.79 |
| GSMUA_Achr11P... | Banana | nucleus | 36.47 | 50.79 |
| CDY21597 | Canola | nucleus | 41.35 | 49.33 |
| KRH64060 | Soybean | nucleus | 43.61 | 47.74 |
| KRH53884 | Soybean | nucleus | 41.73 | 47.44 |
| KRH52087 | Soybean | cytosol, mitochondrion, nucleus | 14.66 | 41.94 |
| Os08t0108500-01 | Rice | nucleus | 45.11 | 39.22 |
| TraesCS7A01G323000.1 | Wheat | nucleus | 45.49 | 38.66 |
| TraesCS7D01G319600.1 | Wheat | nucleus | 45.86 | 38.49 |
| Zm00001d049721_P001 | Maize | nucleus | 41.35 | 38.33 |
| TraesCS7B01G223900.1 | Wheat | nucleus | 45.49 | 37.69 |
| Zm00001d035027_P001 | Maize | nucleus | 44.36 | 35.22 |
| KRH77007 | Soybean | nucleus | 32.33 | 34.26 |
| EES14382 | Sorghum | nucleus | 44.74 | 34.2 |
| KRH57944 | Soybean | nucleus | 32.33 | 33.86 |
| KRH28464 | Soybean | nucleus | 30.45 | 33.47 |
| HORVU7Hr1G077270.3 | Barley | cytosol | 42.48 | 33.33 |
| KRH61303 | Soybean | nucleus | 32.33 | 32.58 |
| KRH52010 | Soybean | nucleus | 30.45 | 31.4 |
| KRH04603 | Soybean | nucleus | 33.08 | 31.21 |
| KRH65648 | Soybean | nucleus, plastid | 19.92 | 29.12 |
| KRH00301 | Soybean | nucleus, plastid | 18.8 | 28.41 |
| KRH75991 | Soybean | nucleus, plastid | 18.8 | 28.09 |
| KRH49427 | Soybean | nucleus, plastid | 17.67 | 26.7 |
| KRH44227 | Soybean | nucleus | 27.44 | 16.48 |
| KRH47179 | Soybean | nucleus | 26.32 | 16.24 |
| KRH35668 | Soybean | nucleus | 19.92 | 15.06 |
| KRH09982 | Soybean | nucleus | 25.19 | 15.06 |
| KRH15121 | Soybean | nucleus | 16.54 | 15.02 |
| KRG91108 | Soybean | nucleus | 19.92 | 15.01 |
| KRH23349 | Soybean | nucleus | 24.81 | 14.67 |
| KRH73015 | Soybean | nucleus | 15.79 | 14.24 |
| KRH05600 | Soybean | nucleus | 18.42 | 13.88 |
| KRH61404 | Soybean | nucleus | 17.29 | 13.86 |
| KRH30960 | Soybean | nucleus | 17.29 | 13.57 |
| KRH15444 | Soybean | nucleus | 17.67 | 13.43 |
| KRG97923 | Soybean | nucleus | 16.92 | 13.27 |
| KRG91107 | Soybean | nucleus | 17.67 | 13.13 |
| KRH35669 | Soybean | nucleus | 17.29 | 12.85 |
Protein Annotations
| EntrezGene:100775296 | MapMan:15.5.32 | Gene3D:4.10.280.10 | EMBL:ACUP02003332 | EnsemblPlantsGene:GLYMA_05G190600 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 |
| UniProt:K7KR56 | EnsemblPlants:KRH59559 | ProteinID:KRH59559 | ProteinID:KRH59559.1 | PFAM:PF00010 | PFscan:PS50888 |
| PANTHER:PTHR12565 | PANTHER:PTHR12565:SF125 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI000233A6C5 | InterPro:bHLH_dom |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr5:+:37635023..37636860
Molecular Weight (calculated)
29434.8 Da
IEP (calculated)
5.734
GRAVY (calculated)
-0.476
Length
266 amino acids
Sequence
(BLAST)
(BLAST)
001: METNTSAFTN VNSTWNLEKM ETNEQQNDEH NIILQVQDPM GSGIWPSNNY HNLLQMHQTP NTTTLSIIAP PPSSSGFLGD ILGVHNLEED EEPEEELGAM
101: KEMMYKIAAM QPVDIDPATI RKPKRRNVRI SDDPQSVAAR HRRERISEKI RILQRLVPGG TKMDTASMLD EAIRYVKFLK RQIRLLQSIP QSSNPPQCIG
201: VATTSHHAST LLLAPSCDWP FAPNVLPSST AATASMDMSA GLGFDVGHAH ACDGSSSFNH HEVISE
101: KEMMYKIAAM QPVDIDPATI RKPKRRNVRI SDDPQSVAAR HRRERISEKI RILQRLVPGG TKMDTASMLD EAIRYVKFLK RQIRLLQSIP QSSNPPQCIG
201: VATTSHHAST LLLAPSCDWP FAPNVLPSST AATASMDMSA GLGFDVGHAH ACDGSSSFNH HEVISE
001: MNNYNMNPSL FQNYTWNNII NSSNNNNKND DHHHQHNNDP IGMAMDQYTQ LHIFNPFSSS HFPPLSSSLT TTTLLSGDQE DDEDEEEPLE ELGAMKEMMY
101: KIAAMQSVDI DPATVKKPKR RNVRISDDPQ SVAARHRRER ISERIRILQR LVPGGTKMDT ASMLDEAIRY VKFLKRQIRL LNNNTGYTPP PPQDQASQAV
201: TTSWVSPPPP PSFGRGGRGV GELI
101: KIAAMQSVDI DPATVKKPKR RNVRISDDPQ SVAARHRRER ISERIRILQR LVPGGTKMDT ASMLDEAIRY VKFLKRQIRL LNNNTGYTPP PPQDQASQAV
201: TTSWVSPPPP PSFGRGGRGV GELI
Arabidopsis Description
HEC3Transcription factor HEC3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXD8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.