Factsheet for AT5G09750.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra028620.1-P	Field mustard	nucleus	85.71	89.72
CDX85799	Canola	nucleus	85.71	89.72
CDY64847	Canola	nucleus	85.71	89.3
CDY21597	Canola	nucleus	78.57	78.92
GSMUA_Achr6P18580_001	Banana	cytosol	42.86	78.69
GSMUA_Achr7P23410_001	Banana	endoplasmic reticulum, extracellular, vacuole	41.07	54.76
GSMUA_Achr5P01290_001	Banana	nucleus	47.77	54.04
GSMUA_Achr11P...	Banana	nucleus	41.52	48.69
KRH59559	Soybean	nucleus	51.79	43.61
KRH43543	Soybean	nucleus	52.68	43.54
AT4G00120.1	Thale cress	nucleus	37.05	41.92
Os08t0108500-01	Rice	nucleus	53.57	39.22
Zm00001d049721_P001	Maize	nucleus	49.55	38.68
Zm00001d035027_P001	Maize	nucleus	53.12	35.52
TraesCS7A01G323000.1	Wheat	nucleus	49.55	35.46
TraesCS7D01G319600.1	Wheat	nucleus	49.11	34.7
TraesCS7B01G223900.1	Wheat	nucleus	49.55	34.58
EES14382	Sorghum	nucleus	53.57	34.48
AT3G50330.1	Thale cress	nucleus	33.93	32.9
HORVU7Hr1G077270.3	Barley	cytosol	48.21	31.86
AT5G67060.1	Thale cress	nucleus	33.93	31.54
AT5G01305.1	Thale cress	nucleus, plastid	23.21	30.41
AT5G43175.1	Thale cress	nucleus	19.64	19.73
AT3G21330.1	Thale cress	nucleus	29.46	17.69
AT1G27740.1	Thale cress	nucleus	18.75	16.28
AT1G66470.1	Thale cress	nucleus	18.75	14.09
AT5G37800.1	Thale cress	nucleus	18.75	13.68
AT2G14760.3	Thale cress	nucleus	20.09	13.2
AT4G33880.1	Thale cress	nucleus	20.09	12.78

Protein Annotations

MapMan:15.5.32	Gene3D:4.10.280.10	EntrezGene:830835	ProteinID:AED91442.1	ArrayExpress:AT5G09750	EnsemblPlantsGene:AT5G09750
RefSeq:AT5G09750	TAIR:AT5G09750	RefSeq:AT5G09750-TAIR-G	EnsemblPlants:AT5G09750.1	TAIR:AT5G09750.1	ProteinID:BAB09533.1
ProteinID:CAB89355.1	ncoils:Coil	GO:GO:0000003	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009653	GO:GO:0009791	GO:GO:0009908	GO:GO:0009987
GO:GO:0010500	GO:GO:0046983	GO:GO:0048462	GO:GO:0048467	Symbol:HEC3	InterPro:HLH_DNA-bd_sf
InterPro:IPR011598	InterPro:IPR036638	RefSeq:NP_196537.1	PFAM:PF00010	PO:PO:0000030	PO:PO:0000034
PO:PO:0007606	PO:PO:0007615	PO:PO:0009073	PO:PO:0020006	PO:PO:0020102	PFscan:PS50888
PANTHER:PTHR12565	PANTHER:PTHR12565:SF125	UniProt:Q9LXD8	SMART:SM00353	SUPFAM:SSF47459	UniParc:UPI00000A8C92
InterPro:bHLH_dom	SEG:seg	:	:	:	:

Description

HEC3Transcription factor HEC3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXD8]

Coordinates

chr5:-:3026109..3027114

Molecular Weight (calculated)

25401.8 Da

IEP (calculated)

6.638

GRAVY (calculated)

-0.854

Length

224 amino acids

Sequence
(BLAST)

001: MNNYNMNPSL FQNYTWNNII NSSNNNNKND DHHHQHNNDP IGMAMDQYTQ LHIFNPFSSS HFPPLSSSLT TTTLLSGDQE DDEDEEEPLE ELGAMKEMMY
101: KIAAMQSVDI DPATVKKPKR RNVRISDDPQ SVAARHRRER ISERIRILQR LVPGGTKMDT ASMLDEAIRY VKFLKRQIRL LNNNTGYTPP PPQDQASQAV
201: TTSWVSPPPP PSFGRGGRGV GELI

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.