Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH61303 | Soybean | nucleus | 82.95 | 81.06 |
| KRH28464 | Soybean | nucleus | 46.9 | 50.0 |
| KRH77007 | Soybean | nucleus | 46.9 | 48.21 |
| KRH04603 | Soybean | nucleus | 46.9 | 42.91 |
| KRH57944 | Soybean | nucleus | 41.47 | 42.13 |
| KRH52087 | Soybean | cytosol, mitochondrion, nucleus | 14.34 | 39.78 |
| KRH53884 | Soybean | nucleus | 31.4 | 34.62 |
| KRH64060 | Soybean | nucleus | 31.4 | 33.33 |
| KRH59559 | Soybean | nucleus | 31.4 | 30.45 |
| KRH43543 | Soybean | nucleus | 31.4 | 29.89 |
| KRH65648 | Soybean | nucleus, plastid | 19.77 | 28.02 |
| KRH00301 | Soybean | nucleus, plastid | 18.99 | 27.84 |
| KRH75991 | Soybean | nucleus, plastid | 18.6 | 26.97 |
| KRH49427 | Soybean | nucleus, plastid | 18.22 | 26.7 |
| KRH47179 | Soybean | nucleus | 30.62 | 18.33 |
| KRH09982 | Soybean | nucleus | 30.23 | 17.53 |
| KRH44227 | Soybean | nucleus | 29.84 | 17.38 |
| KRH23349 | Soybean | nucleus | 29.84 | 17.11 |
| KRG91108 | Soybean | nucleus | 18.99 | 13.88 |
| KRH35669 | Soybean | nucleus | 18.99 | 13.69 |
| KRG91107 | Soybean | nucleus | 18.99 | 13.69 |
| KRH15121 | Soybean | nucleus | 15.5 | 13.65 |
| KRH73015 | Soybean | nucleus | 15.5 | 13.56 |
| KRH35668 | Soybean | nucleus | 18.22 | 13.35 |
| KRH61404 | Soybean | nucleus | 16.67 | 12.95 |
| KRH15444 | Soybean | nucleus | 16.67 | 12.29 |
| KRH05600 | Soybean | nucleus | 16.67 | 12.18 |
| KRG97923 | Soybean | nucleus | 15.89 | 12.09 |
| KRH30960 | Soybean | nucleus | 15.89 | 12.09 |
Protein Annotations
| EntrezGene:100788158 | MapMan:15.5.32 | Gene3D:4.10.280.10 | ProteinID:ABC47864.1 | EMBL:ACUP02003402 | EnsemblPlantsGene:GLYMA_06G040800 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 |
| InterPro:IPR036638 | EnsemblPlants:KRH52010 | ProteinID:KRH52010 | ProteinID:KRH52010.1 | PFAM:PF00010 | PFscan:PS50888 |
| PANTHER:PTHR12565 | PANTHER:PTHR12565:SF74 | UniProt:Q00M67 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0000E583CB |
| InterPro:bHLH_dom | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr6:-:3066046..3067280
Molecular Weight (calculated)
29399.0 Da
IEP (calculated)
7.180
GRAVY (calculated)
-0.719
Length
258 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQQHMDMMT MMMLQHLPEF SEPYTHTMEG FHPPSEEFCG NNNNNIRNTM QLADLIDNNN PLSPIPWSSS YSFTHLPAST TEISFSNNSH PTTPIMLQEH
101: EQQYEGANAN PYGGEKRNSM AAMREMIFRM AAMQPIHIDP ESVKAPKRRN VKISKDPQSV AARHRRERIS ERIRILQRLV PGGTKMDTAS MLDEAIHYVK
201: FLKTQVQSLE RASSANNNIR PLNAAGQIGF PVASTPYFPL PSKPYQAPNM DNMHDTYH
101: EQQYEGANAN PYGGEKRNSM AAMREMIFRM AAMQPIHIDP ESVKAPKRRN VKISKDPQSV AARHRRERIS ERIRILQRLV PGGTKMDTAS MLDEAIHYVK
201: FLKTQVQSLE RASSANNNIR PLNAAGQIGF PVASTPYFPL PSKPYQAPNM DNMHDTYH
001: MDNSDILMNM MMQQMEKLPE HFSNSNPNPN PHNIMMLSES NTHPFFFNPT HSHLPFDQTM PHHQPGLNFR YAPSPSSSLP EKRGGCSDNA NMAAMREMIF
101: RIAVMQPIHI DPESVKPPKR KNVRISKDPQ SVAARHRRER ISERIRILQR LVPGGTKMDT ASMLDEAIHY VKFLKKQVQS LEEHAVVNGG GMTAVAGGAL
201: AGTVGGGYGG KGCGIMRSDH HQMLGNAQIL R
101: RIAVMQPIHI DPESVKPPKR KNVRISKDPQ SVAARHRRER ISERIRILQR LVPGGTKMDT ASMLDEAIHY VKFLKKQVQS LEEHAVVNGG GMTAVAGGAL
201: AGTVGGGYGG KGCGIMRSDH HQMLGNAQIL R
Arabidopsis Description
HEC2Transcription factor HEC2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SND4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.