CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH52087	Soybean	cytosol, mitochondrion, nucleus	22.29	79.57
KRH05600	Soybean	nucleus	45.48	42.78
KRH15444	Soybean	nucleus	44.58	42.29
KRH35669	Soybean	nucleus	34.34	31.84
KRG91107	Soybean	nucleus	33.73	31.28
KRG91108	Soybean	nucleus	33.13	31.16
KRH35668	Soybean	nucleus	32.83	30.97
KRH65648	Soybean	nucleus, plastid	12.35	22.53
KRH00301	Soybean	nucleus, plastid	11.75	22.16
KRH75991	Soybean	nucleus, plastid	11.75	21.91
KRH49427	Soybean	nucleus, plastid	11.45	21.59
KRH57944	Soybean	nucleus	15.36	20.08
KRH15121	Soybean	nucleus	17.47	19.8
KRH73015	Soybean	nucleus	17.47	19.66
KRH28464	Soybean	nucleus	13.55	18.59
KRH04603	Soybean	nucleus	15.66	18.44
KRH30960	Soybean	nucleus	18.67	18.29
KRG97923	Soybean	nucleus	18.67	18.29
KRH53884	Soybean	nucleus	12.65	17.95
KRH64060	Soybean	nucleus	12.95	17.7
KRH77007	Soybean	nucleus	13.25	17.53
KRH43543	Soybean	nucleus	14.16	17.34
KRH59559	Soybean	nucleus	13.86	17.29
KRH61303	Soybean	nucleus	13.55	17.05
KRH52010	Soybean	nucleus	12.95	16.67
KRH47179	Soybean	nucleus	19.28	14.85
KRH44227	Soybean	nucleus	19.28	14.45
KRH09982	Soybean	nucleus	18.67	13.93
KRH23349	Soybean	nucleus	18.07	13.33

Protein Annotations

MapMan:15.5.32	Gene3D:4.10.280.10	EMBL:ACUP02002162	EnsemblPlantsGene:GLYMA_04G045300	GO:GO:0001046	GO:GO:0001228
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006366
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0045944	GO:GO:0046983
InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	UniProt:K7KI25	EnsemblPlants:KRH61404	ProteinID:KRH61404
ProteinID:KRH61404.1	PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR16223	PANTHER:PTHR16223:SF105	SMART:SM00353
SUPFAM:SSF47459	UniParc:UPI0002339510	InterPro:bHLH_dom	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr4:+:3616726..3618560

Molecular Weight (calculated)

37010.2 Da

IEP (calculated)

5.862

GRAVY (calculated)

-0.747

Length

332 amino acids

Sequence
(BLAST)

001: MGPGVGAFPD GERDCFGKML ANEAHYCSPQ LLEEDDGNVG MQSMFCSTLD VGGNKNMFYS FDSHNSSLQY ISQESSHNNS TCCGHSVFMA NPEDHTNYHF
101: GHVDHVLANS TSMDFCMIDE KNPGSFVQSD IVMKENASLN EDEGSDKSEN VFPAKHLKFK RMSDHMPELK VHVEDKINSH GNGNKKPRVS KDEQHCMKNQ
201: KLDKIGNQAE EINAGSDGHS SSSYTREDDN ASALNFKGKT KASKGSATDP QSLYARKRRE RIDDRLRILQ NLVPNGTKVD ISTMLEEAVQ YVKFLQLQNK
301: LLSSDDLWMY APIAYNGLDL VLNLNPKSSP PL

Best Arabidopsis Sequence Match ( AT4G33880.1 )
(BLAST)

001: MEAMGEWSNN LGGMYTYATE EADFMNQLLA SYDHPGTGSS SGAAASGDHQ GLYWNLGSHH NHLSLVSEAG SFCFSQESSS YSAGNSGYYT VVPPTVEENQ
101: NETMDFGMED VTINTNSYLV GEETSECDVE KYSSGKTLMP LETVVENHDD EESLLQSEIS VTTTKSLTGS KKRSRATSTD KNKRARVNKR AQKNVEMSGD
201: NNEGEEEEGE TKLKKRKNGA MMSRQNSSTT FCTEEESNCA DQDGGGEDSS SKEDDPSKAL NLNGKTRASR GAATDPQSLY ARKRRERINE RLRILQNLVP
301: NGTKVDISTM LEEAVHYVKF LQLQIKLLSS DDLWMYAPIA FNGMDIGLSS PR

Arabidopsis Description

BHLH85Transcription factor bHLH85 [Source:UniProtKB/Swiss-Prot;Acc:Q84WK0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.