Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- plastid 2
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G66470.1 | KRH14475 | AT2G42870.1 | 21798944 |
| AT1G66470.1 | KRH73670 | AT2G42870.1 | 21798944 |
| AT1G66470.1 | KRH04244 | AT5G47100.1 | 21798944 |
| AT1G66470.1 | KRH28207 | AT5G47100.1 | 21798944 |
| AT1G66470.1 | KRH57533 | AT5G47100.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG97923 | Soybean | nucleus | 88.2 | 88.2 |
| GSMUA_Achr3P01250_001 | Banana | cytosol, nucleus, plastid | 24.78 | 69.42 |
| KRH15121 | Soybean | nucleus | 58.11 | 67.24 |
| KRH73015 | Soybean | nucleus | 57.23 | 65.76 |
| VIT_14s0006g01470.t01 | Wine grape | nucleus | 46.9 | 45.82 |
| KRH52087 | Soybean | cytosol, mitochondrion, nucleus | 12.09 | 44.09 |
| PGSC0003DMT400078776 | Potato | nucleus | 41.0 | 43.85 |
| Solyc02g091440.1.1 | Tomato | nucleus | 41.0 | 43.85 |
| CDY55674 | Canola | nucleus | 35.99 | 42.07 |
| CDX68049 | Canola | nucleus | 35.69 | 41.72 |
| CDX96145 | Canola | nucleus | 35.69 | 41.72 |
| CDY11694 | Canola | nucleus | 35.69 | 41.72 |
| GSMUA_Achr10P... | Banana | nucleus | 36.58 | 41.61 |
| AT1G66470.1 | Thale cress | nucleus | 36.28 | 41.28 |
| CDY61813 | Canola | nucleus | 35.4 | 39.34 |
| CDY58387 | Canola | nucleus | 35.4 | 39.09 |
| Bra019708.1-P | Field mustard | nucleus | 35.1 | 38.76 |
| AT5G37800.1 | Thale cress | nucleus | 35.1 | 38.76 |
| GSMUA_Achr2P22860_001 | Banana | nucleus | 35.99 | 37.89 |
| Bra004169.1-P | Field mustard | nucleus | 29.2 | 36.94 |
| GSMUA_Achr6P09370_001 | Banana | nucleus | 36.58 | 36.58 |
| TraesCS3A01G006300.1 | Wheat | cytosol, nucleus, plastid | 29.5 | 36.5 |
| Os02t0710300-01 | Rice | nucleus | 32.15 | 36.33 |
| Zm00001d017804_P001 | Maize | nucleus | 31.56 | 36.27 |
| TraesCS3B01G010400.1 | Wheat | nucleus | 29.2 | 36.13 |
| TraesCS3B01G007700.1 | Wheat | nucleus | 29.2 | 36.13 |
| TraesCS3D01G004300.1 | Wheat | cytosol, nucleus, plastid | 29.2 | 36.0 |
| EES07381 | Sorghum | nucleus | 30.97 | 34.31 |
| TraesCS6B01G303500.1 | Wheat | nucleus | 28.91 | 34.27 |
| TraesCS6D01G256600.1 | Wheat | nucleus | 28.91 | 33.91 |
| TraesCS6B01G303600.1 | Wheat | cytosol, nucleus, plastid | 28.32 | 33.8 |
| TraesCS6D01G256500.1 | Wheat | cytosol | 28.02 | 33.57 |
| TraesCS6A01G276100.1 | Wheat | nucleus | 28.61 | 33.33 |
| TraesCS6A01G276200.1 | Wheat | cytosol, nucleus, plastid | 28.32 | 33.22 |
| EES00435 | Sorghum | nucleus | 28.32 | 33.1 |
| TraesCS6D01G256300.1 | Wheat | nucleus | 28.61 | 32.99 |
| Os01t0111500-01 | Rice | nucleus | 28.61 | 32.88 |
| TraesCS7A01G229900.1 | Wheat | nucleus | 27.43 | 32.63 |
| Zm00001d008444_P001 | Maize | nucleus | 30.68 | 32.0 |
| TraesCS7D01G230600.1 | Wheat | nucleus | 26.84 | 31.82 |
| TraesCS6D01G256400.1 | Wheat | nucleus | 25.66 | 31.64 |
| TraesCS7B01G195800.1 | Wheat | nucleus | 27.14 | 31.51 |
| HORVU7Hr1G046580.1 | Barley | plasma membrane, vacuole | 27.73 | 28.4 |
| Os06t0496400-01 | Rice | nucleus | 24.19 | 27.89 |
| KRH65648 | Soybean | nucleus, plastid | 12.68 | 23.63 |
| KRH49427 | Soybean | nucleus, plastid | 12.09 | 23.3 |
| KRH00301 | Soybean | nucleus, plastid | 12.09 | 23.3 |
| KRH75991 | Soybean | nucleus, plastid | 12.09 | 23.03 |
| KRH28464 | Soybean | nucleus | 13.86 | 19.42 |
| KRH57944 | Soybean | nucleus | 14.45 | 19.29 |
| KRH64060 | Soybean | nucleus | 13.57 | 18.93 |
| KRH61404 | Soybean | nucleus | 18.29 | 18.67 |
| KRH53884 | Soybean | nucleus | 12.68 | 18.38 |
| KRH77007 | Soybean | nucleus | 13.57 | 18.33 |
| KRH15444 | Soybean | nucleus | 18.29 | 17.71 |
| KRH35668 | Soybean | nucleus | 18.29 | 17.61 |
| KRH04603 | Soybean | nucleus | 14.45 | 17.38 |
| KRH43543 | Soybean | nucleus | 13.86 | 17.34 |
| KRH35669 | Soybean | nucleus | 18.29 | 17.32 |
| KRH59559 | Soybean | nucleus | 13.57 | 17.29 |
| KRG91107 | Soybean | nucleus | 17.7 | 16.76 |
| KRG91108 | Soybean | nucleus | 17.4 | 16.71 |
| KRH61303 | Soybean | nucleus | 12.98 | 16.67 |
| KRH05600 | Soybean | nucleus | 17.11 | 16.43 |
| KRH52010 | Soybean | nucleus | 12.09 | 15.89 |
| KRH09982 | Soybean | nucleus | 13.27 | 10.11 |
| KRH23349 | Soybean | nucleus | 13.27 | 10.0 |
| KRH47179 | Soybean | nucleus | 12.68 | 9.98 |
| KRH44227 | Soybean | nucleus | 12.39 | 9.48 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | EMBL:ACUP02007109 | EnsemblPlantsGene:GLYMA_11G217700 | GO:GO:0001046 | GO:GO:0001228 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006366 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 |
| InterPro:HLH_DNA-bd_sf | UniProt:I1LME2 | InterPro:IPR011598 | InterPro:IPR036638 | EnsemblPlants:KRH30960 | ProteinID:KRH30960 |
| ProteinID:KRH30960.1 | PFAM:PF00010 | PFscan:PS50888 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI000233CCA3 |
| InterPro:bHLH_dom | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr11:+:31227090..31229157
Molecular Weight (calculated)
37688.6 Da
IEP (calculated)
9.113
GRAVY (calculated)
-0.704
Length
339 amino acids
Sequence
(BLAST)
(BLAST)
001: MALAKDQRIP RDSSMSSKVQ NCVFSETSVE VTSMTVHRVN EYHKSVLEDQ EDGSPTTNGL SNDSAITHSP PLCGSVKGYA YKGTNYQLEE AEPLINFKGY
101: SNLMQGGGSL LSFQQNKMVP NNCYMKENGQ KEVCVWENNL HQGRDHWNQT SPRNTRDMRL VENANCFQTS SGYISIVNNA KEKQHGQSSS GLLYPAPTIP
201: NASSLHKLGA QESVLQKRPF MGESMKAAKK QCSIESKTTK HNSSPSKDPQ SVAAKNRRER ISERLKILQE LVPNGSKVDL VTMLEKAISY VKFLQLQVKV
301: LATDEFWPVQ GGKPPDISQV KEVIDTILSS QKERSSSSK
101: SNLMQGGGSL LSFQQNKMVP NNCYMKENGQ KEVCVWENNL HQGRDHWNQT SPRNTRDMRL VENANCFQTS SGYISIVNNA KEKQHGQSSS GLLYPAPTIP
201: NASSLHKLGA QESVLQKRPF MGESMKAAKK QCSIESKTTK HNSSPSKDPQ SVAAKNRRER ISERLKILQE LVPNGSKVDL VTMLEKAISY VKFLQLQVKV
301: LATDEFWPVQ GGKPPDISQV KEVIDTILSS QKERSSSSK
001: MSLINEHCNE RNYISTPNSS EDLSSPQNCG LDEGASASSS STINSDHQNN QGFVFYPSGE TIEDHNSLMD FNASSFFTFD NHRSLISPVT NGGAFPVVDG
101: NMSYSYDGWS HHQVDSISPR VIKTPNSFET TSSFGLTSNS MSKPATNHGN GDWLYSGSTI VNIGSRHEST SPKLAGNKRP FTGENTQLSK KPSSGTNGKI
201: KPKATTSPKD PQSLAAKNRR ERISERLKVL QELVPNGTKV DLVTMLEKAI GYVKFLQVQV KVLAADEFWP AQGGKAPDIS QVKEAIDAIL SSSQRDSNST
301: RETSIAE
101: NMSYSYDGWS HHQVDSISPR VIKTPNSFET TSSFGLTSNS MSKPATNHGN GDWLYSGSTI VNIGSRHEST SPKLAGNKRP FTGENTQLSK KPSSGTNGKI
201: KPKATTSPKD PQSLAAKNRR ERISERLKVL QELVPNGTKV DLVTMLEKAI GYVKFLQVQV KVLAADEFWP AQGGKAPDIS QVKEAIDAIL SSSQRDSNST
301: RETSIAE
Arabidopsis Description
BHLH86RSL1 [Source:UniProtKB/TrEMBL;Acc:A0A178UPA1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.