CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 3
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG91301
KRH04603
KRH04711
KRH05665
KRH15381
KRH28464
KRH30315
KRH33115
KRH35520
KRH43245
KRH50217
KRH53884
KRH57944
KRH59405
KRH64060
KRH71214
KRH75261
KRH77007

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G42870.1	KRH50217	AT2G43650.1	21798944
AT2G42870.1	KRH71214	AT2G43650.1	21798944
AT2G42870.1	KRH30315	AT2G44950.1	21798944
AT2G42870.1	KRH75261	AT2G44950.1	21798944
AT2G42870.1	KRG91301	AT3G22440.1	21798944
AT2G42870.1	KRH35520	AT3G22440.1	21798944
AT2G42870.1	KRH04603	AT3G50330.1	21798944
AT2G42870.1	KRH28464	AT3G50330.1	21798944
AT2G42870.1	KRH57944	AT3G50330.1	21798944
AT2G42870.1	KRH77007	AT3G50330.1	21798944
AT2G42870.1	KRH53884	AT4G00120.1	21798944
AT2G42870.1	KRH64060	AT4G00120.1	21798944
AT2G42870.1	KRH33115	AT4G39690.1	21798944
AT2G42870.1	KRH43245	AT4G39690.1	21798944
AT2G42870.1	KRH59405	AT4G39690.1	21798944
AT2G42870.1	KRH04711	AT5G67110.1	21798944
AT2G42870.1	KRH05665	AT5G67110.1	21798944
AT2G42870.1	KRH15381	AT5G67110.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH14475	Soybean	nucleus	80.62	74.82
Solyc07g056360.1.1	Tomato	nucleus	40.31	50.0
CDY00592	Canola	plastid	37.98	42.24
Bra014551.1-P	Field mustard	plastid	37.98	42.24
CDX89007	Canola	plastid	37.98	42.24
PGSC0003DMT400044708	Potato	cytosol	35.66	42.2
AT3G58850.1	Thale cress	plastid	37.98	41.53
CDX83516	Canola	plastid	36.43	40.52
Bra016854.1-P	Field mustard	plastid	36.43	40.52
Bra007422.1-P	Field mustard	plastid	36.43	40.52
CDY14860	Canola	plastid	36.43	40.52
CDY49257	Canola	plastid	36.43	40.52
CDY50830	Canola	plastid	36.43	40.52
CDY68147	Canola	plastid	36.43	40.52
Bra004712.1-P	Field mustard	plastid	36.43	40.52
Bra000276.1-P	Field mustard	plastid	36.43	40.52
AT2G42870.1	Thale cress	plastid	36.43	39.83
CDX71918	Canola	plastid	33.33	39.81
CDY42818	Canola	plastid	35.66	39.32
VIT_12s0142g00160.t01	Wine grape	mitochondrion	34.11	29.14

Protein Annotations

EMBL:ACUP02001286	EnsemblPlants:KRH73670	EnsemblPlantsGene:GLYMA_02G286900	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0046983	PANTHER:PTHR33124	PANTHER:PTHR33124:SF3	ProteinID:KRH73670	ProteinID:KRH73670.1	SEG:seg
UniParc:UPI0001CAA044	UniProt:I1JJ47	MapMan:15.5.32	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:46750055..46751644

Molecular Weight (calculated)

14854.4 Da

IEP (calculated)

6.814

GRAVY (calculated)

-1.016

Length

129 amino acids

Sequence
(BLAST)

001: MEQEDNTIIP TFLRKPAADQ NNNNNNNNNS PTTPSHKSLH VFRRSRRRWR KEVAVKEDED VDEGDDREEI ERKIHALQRI VPGGESLGVD KLFDETAGYI
101: LALQYQVKAL RALTGFFDKL EKEKTKFGG

Best Arabidopsis Sequence Match ( AT2G42870.1 )
(BLAST)

001: MEETLATPDA TRRSLSPSCS ATVKSRAAGF ERRTKRRLSE TNASVREDRE EAEEEEDEVK EKIEALQRII PGGAALGVDA LFEETAGYIL SLQCQIKTIK
101: VLTSFLQRID QEDMKFGG

Arabidopsis Description

PAR1Transcription factor PAR1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJH0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.