Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 1
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004712.1-P | Field mustard | plastid | 81.36 | 82.76 |
| CDY68147 | Canola | plastid | 80.51 | 81.9 |
| CDY50830 | Canola | plastid | 78.81 | 80.17 |
| Bra000276.1-P | Field mustard | plastid | 77.97 | 79.31 |
| CDX83516 | Canola | plastid | 77.97 | 79.31 |
| Bra016854.1-P | Field mustard | plastid | 77.12 | 78.45 |
| CDY14860 | Canola | plastid | 77.12 | 78.45 |
| CDY42818 | Canola | plastid | 77.12 | 77.78 |
| AT3G58850.1 | Thale cress | plastid | 61.86 | 61.86 |
| Solyc07g056360.1.1 | Tomato | nucleus | 44.07 | 50.0 |
| PGSC0003DMT400044708 | Potato | cytosol | 42.37 | 45.87 |
| KRH73670 | Soybean | plastid | 39.83 | 36.43 |
| KRH14475 | Soybean | nucleus | 37.29 | 31.65 |
| VIT_12s0142g00160.t01 | Wine grape | mitochondrion | 35.59 | 27.81 |
Protein Annotations
| MapMan:15.5.32 | EntrezGene:818887 | UniProt:A0A178VRP1 | ProteinID:AAD21722.1 | ProteinID:AEC10179.1 | EMBL:AK118184 |
| ArrayExpress:AT2G42870 | EnsemblPlantsGene:AT2G42870 | RefSeq:AT2G42870 | TAIR:AT2G42870 | RefSeq:AT2G42870-TAIR-G | EnsemblPlants:AT2G42870.1 |
| TAIR:AT2G42870.1 | EMBL:AY084291 | EMBL:BN000864 | EMBL:BT004925 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003712 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009628 | GO:GO:0009641 | GO:GO:0009719 |
| GO:GO:0009742 | GO:GO:0009987 | GO:GO:0032502 | GO:GO:0040007 | GO:GO:0040008 | GO:GO:0042803 |
| GO:GO:0045892 | GO:GO:0046983 | RefSeq:NP_565988.1 | ProteinID:OAP07512.1 | Symbol:PAR1 | PO:PO:0000037 |
| PO:PO:0000293 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007103 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0020038 |
| PO:PO:0025022 | PANTHER:PTHR33124 | PANTHER:PTHR33124:SF3 | UniProt:Q9SJH0 | UniParc:UPI000000C509 | SEG:seg |
Description
PAR1Transcription factor PAR1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJH0]
Coordinates
chr2:-:17836416..17837618
Molecular Weight (calculated)
13151.5 Da
IEP (calculated)
4.619
GRAVY (calculated)
-0.581
Length
118 amino acids
Sequence
(BLAST)
(BLAST)
001: MEETLATPDA TRRSLSPSCS ATVKSRAAGF ERRTKRRLSE TNASVREDRE EAEEEEDEVK EKIEALQRII PGGAALGVDA LFEETAGYIL SLQCQIKTIK
101: VLTSFLQRID QEDMKFGG
101: VLTSFLQRID QEDMKFGG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.