Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- cytosol 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004712.1-P | Field mustard | plastid | 96.55 | 96.55 |
| CDY68147 | Canola | plastid | 95.69 | 95.69 |
| CDX83516 | Canola | plastid | 87.07 | 87.07 |
| CDY14860 | Canola | plastid | 86.21 | 86.21 |
| CDY42818 | Canola | plastid | 84.48 | 83.76 |
| AT2G42870.1 | Thale cress | plastid | 80.17 | 78.81 |
| CDX89007 | Canola | plastid | 64.66 | 64.66 |
| CDY00592 | Canola | plastid | 64.66 | 64.66 |
| CDX71918 | Canola | plastid | 56.9 | 61.11 |
| CDY49257 | Canola | plastid | 60.34 | 60.34 |
| Solyc07g056360.1.1 | Tomato | nucleus | 42.24 | 47.12 |
| PGSC0003DMT400044708 | Potato | cytosol | 40.52 | 43.12 |
| KRH73670 | Soybean | plastid | 40.52 | 36.43 |
| KRH14475 | Soybean | nucleus | 38.79 | 32.37 |
| VIT_12s0142g00160.t01 | Wine grape | mitochondrion | 36.21 | 27.81 |
Protein Annotations
| EnsemblPlants:CDY50830 | EnsemblPlantsGene:GSBRNA2T00097557001 | PANTHER:PTHR33124 | PANTHER:PTHR33124:SF3 | ProteinID:CDY50830 | ProteinID:CDY50830.1 |
| SEG:seg | UniParc:UPI0004EE442C | UniProt:A0A078IIH1 | MapMan:15.5.32 | : | : |
Description
BnaC04g52670DBnaC04g52670D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IIH1]
Coordinates
chrLK032942:-:83599..84048
Molecular Weight (calculated)
12798.3 Da
IEP (calculated)
5.281
GRAVY (calculated)
-0.377
Length
116 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKTLATPDT TRSLSPSWSV SVESPAAGFE RRTKRRLSQT KASVCVSGEV DEDEEEVKEK IEALQRIIPG GTALGVDALF EETAGYIMSL QCKIKTIKVL
101: TSFLQRLDKQ DMKFGG
101: TSFLQRLDKQ DMKFGG
001: MEETLATPDA TRRSLSPSCS ATVKSRAAGF ERRTKRRLSE TNASVREDRE EAEEEEDEVK EKIEALQRII PGGAALGVDA LFEETAGYIL SLQCQIKTIK
101: VLTSFLQRID QEDMKFGG
101: VLTSFLQRID QEDMKFGG
Arabidopsis Description
PAR1Transcription factor PAR1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJH0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.