CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY41998	Canola	extracellular	83.93	40.0
Bra011841.1-P	Field mustard	cytosol, nucleus, peroxisome	64.29	33.49
AT4G39690.1	Thale cress	mitochondrion	79.46	13.69
CDY63447	Canola	plastid	76.79	13.27
GSMUA_Achr5P16670_001	Banana	cytosol, mitochondrion	14.29	13.11
CDX90351	Canola	plastid	76.79	12.97
VIT_07s0031g01190.t01	Wine grape	mitochondrion	71.43	11.98
Solyc04g054470.2.1	Tomato	nucleus	67.86	11.89
TraesCS2D01G529400.1	Wheat	mitochondrion	60.71	11.24
TraesCS2B01G557000.2	Wheat	mitochondrion	60.71	11.24
TraesCS2A01G526700.1	Wheat	mitochondrion	60.71	11.24
KRH59405	Soybean	mitochondrion	64.29	11.23
KRH43245	Soybean	mitochondrion	62.5	10.84
EES12936	Sorghum	mitochondrion	58.93	10.58
Zm00001d026396_P004	Maize	mitochondrion	58.04	10.43
HORVU2Hr1G116190.1	Barley	plastid	62.5	10.43
GSMUA_Achr5P16660_001	Banana	cytosol, extracellular, plastid	50.0	9.35
KRH33115	Soybean	nucleus	1.79	0.82
Os04t0636600-02	Rice	mitochondrion	0.0	0.0
Zm00001d002145_P001	Maize	mitochondrion	0.0	0.0

Protein Annotations

EnsemblPlants:CDY42646	EnsemblPlantsGene:GSBRNA2T00075155001	GO:A0A078HY77	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0016020	GO:GO:0016021	InterPro:Mt-IM_prot_Mitofilin
PANTHER:PTHR15415	PANTHER:PTHR15415:SF7	PFAM:PF09731	ProteinID:CDY42646	ProteinID:CDY42646.1	UniParc:UPI0004EF0EFF
UniProt:A0A078HY77	MapMan:5.2.3.3.2.1.1	:	:	:	:

Description

BnaC01g00580DBnaC01g00580D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HY77]

Coordinates

chrLK032530:+:210039..210567

Molecular Weight (calculated)

12126.5 Da

IEP (calculated)

5.973

GRAVY (calculated)

-0.152

Length

112 amino acids

Sequence
(BLAST)

001: MAFYARSEEA RQSHSVHKLA LGGALALEDT LSKGLPIQKE IDMLQTYLEG IHQDSMLDLV LSSLPEEARS SGTDTVQQLN QTFNTLKGAL RHFSLIPRPG
101: GGGILAHSLA DI

Best Arabidopsis Sequence Match ( AT4G39690.1 )
(BLAST)

001: MLRKSVLELS SRLSIKRFPR NLGAQRFHLS SSRNASTSGK NGLPGAKPVG KPDASKVDPP KVTPPPPTKG NSSKVVIGGV AIAGAFLVAY QTGYLDQYLG
101: KEQQKLSERI HSDALTEKLE EAHHLNVPSG VEDSTEKDGK VETQPQVTHS EASEGVQSDI ELQPESDLSS DRFTYISSNQ EETPQETVID RAEINLPISA
201: SEDSGAKPDM PSEIISEAES VKLEAVPKPG DSPIIVNAQS SSVHRESETE SASPKDPAAL KTPEDGIERE VQLPGSLLKE YNLEGSDTES TGSSSIGEQI
301: TKETEAFPNS TEGLKDSYMT EDGKLVLDFL AAIHAAEKQQ AHLDAQVFAE ELRALKEKYE NELRDLRARE LMRIEEAAIL DKELKRERTK AAAAIKAIQE
401: RMEDKLKAEL EQKETEAQLA LSKAEELAKA EMISTIAKEK AAQIEKMAEA DLNIKALSMA FYARSEEARQ SHSVHKLALG ALALDDTLSK GLPVQKEIDT
501: LQTYLEGTHK DSILGLVLSS LPEEARSNGT DTVLQLNQKF DTLKGTLRHF SLIPPGGGGI LAHSLAHVAS SLKFKEVDQA NGGIESVIKK VDNYLAEGKL
601: AEAAATLEEG VKGSKAEEIV SDWVRRARNR AITEQALTLL QSYATCVSLT

Arabidopsis Description

AT4g39690/T19P19_80 [Source:UniProtKB/TrEMBL;Acc:Q9ASV5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.