Factsheet for Os04t0636600-02

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
nucleus 2

Predictors

GFP

MS/MS

Papers

mitochondrion: 19010998
mitochondrion: 23027867
plastid: 27992503

msms PMID: 23027867 doi

G Liu, H Tian, YQ Huang, J Hu, YX Ji, SQ Li, YQ Feng, L Guo, YG Zhu

State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan 430072, China.

msms PMID: 19010998 doi

S Huang, NL Taylor, R Narsai, H Eubel, J Whelan, AH Millar

Australian Research Council Centre of Excellence in Plant Energy Biology, M316, University of Western Australia, Crawley, 6009 Western Australia, Australia.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d002145_P001	Maize	mitochondrion	56.91	48.28
TraesCS2A01G526700.1	Wheat	mitochondrion	59.89	36.53
TraesCS2D01G529400.1	Wheat	mitochondrion	59.62	36.36
TraesCS2B01G557000.2	Wheat	mitochondrion	59.35	36.2
EES12936	Sorghum	mitochondrion	58.54	34.62
Zm00001d026396_P004	Maize	mitochondrion	56.1	33.23
HORVU2Hr1G116190.1	Barley	plastid	57.99	31.89
GSMUA_Achr5P16660_001	Banana	cytosol, extracellular, plastid	31.44	19.37
KRH33115	Soybean	nucleus	10.3	15.64
VIT_07s0031g01190.t01	Wine grape	mitochondrion	27.37	15.12
KRH43245	Soybean	mitochondrion	24.12	13.78
KRH59405	Soybean	mitochondrion	23.85	13.73
AT4G39690.1	Thale cress	mitochondrion	24.12	13.69
Solyc04g054470.2.1	Tomato	nucleus	23.31	13.46
CDX90351	Canola	plastid	23.85	13.27
CDY63447	Canola	plastid	23.31	13.27
Bra010667.1-P	Field mustard	plastid	23.04	12.94
Bra011841.1-P	Field mustard	cytosol, nucleus, peroxisome	6.78	11.63
CDY41998	Canola	extracellular	2.44	3.83
CDY42646	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Os04t0636600-02	EnsemblPlantsGene:Os04g0636600	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0005743	GO:GO:0016020	GO:GO:0016021	InterPro:Mt-IM_prot_Mitofilin	ncoils:Coil
PANTHER:PTHR15415	PANTHER:PTHR15415:SF7	ProteinID:BAS91220.1	SEG:seg	UniParc:UPI000393A7D2	UniProt:A0A0P0WFK3
MapMan:5.2.3.3.2.1.1	:	:	:	:	:

Description

Hypothetical conserved gene. (Os04t0636600-01);Mitochondrial inner membrane protein Mitofilin domain containing protein. (Os04t0636600-02)

Coordinates

chr4:-:32370472..32378256

Molecular Weight (calculated)

40503.2 Da

IEP (calculated)

4.733

GRAVY (calculated)

-0.824

Length

369 amino acids

Sequence
(BLAST)

001: MLRRCVRDLY PLRPLRRIPR PISSEVPSPA FLRPRSKSTK ASQQSSTQNT VPGPQGEPSQ SGSNVPKVLL GTLMVGAAAM AAYQAGYIDD QFKDIIFPST
101: MKEKNIRKIY DDLKAPSEQK VDEKQVVSDP NVDIVQNSNN EAHPQKDLPT EGMGPPEIPT TDEQTVSSEE KEKETLAQGT PQIPDEHGAA AKPLSQDIPV
201: IDINPSVDDK ATGEVLPEQT DKTTTSVSPV QSSLATAGPS HHVHTDTDGP KDPSSAGAVE HKSLAETYLL QEPDNSKDMG AKESKHDGVI STGTSDDGKI
301: VLDIIEAIHA AERKQADADA YMYSEEKRKL KEKYEKELKD TRARELMYAE KQQFWQGAEE REIEVSCCD

Best Arabidopsis Sequence Match ( AT4G39690.1 )
(BLAST)

001: MLRKSVLELS SRLSIKRFPR NLGAQRFHLS SSRNASTSGK NGLPGAKPVG KPDASKVDPP KVTPPPPTKG NSSKVVIGGV AIAGAFLVAY QTGYLDQYLG
101: KEQQKLSERI HSDALTEKLE EAHHLNVPSG VEDSTEKDGK VETQPQVTHS EASEGVQSDI ELQPESDLSS DRFTYISSNQ EETPQETVID RAEINLPISA
201: SEDSGAKPDM PSEIISEAES VKLEAVPKPG DSPIIVNAQS SSVHRESETE SASPKDPAAL KTPEDGIERE VQLPGSLLKE YNLEGSDTES TGSSSIGEQI
301: TKETEAFPNS TEGLKDSYMT EDGKLVLDFL AAIHAAEKQQ AHLDAQVFAE ELRALKEKYE NELRDLRARE LMRIEEAAIL DKELKRERTK AAAAIKAIQE
401: RMEDKLKAEL EQKETEAQLA LSKAEELAKA EMISTIAKEK AAQIEKMAEA DLNIKALSMA FYARSEEARQ SHSVHKLALG ALALDDTLSK GLPVQKEIDT
501: LQTYLEGTHK DSILGLVLSS LPEEARSNGT DTVLQLNQKF DTLKGTLRHF SLIPPGGGGI LAHSLAHVAS SLKFKEVDQA NGGIESVIKK VDNYLAEGKL
601: AEAAATLEEG VKGSKAEEIV SDWVRRARNR AITEQALTLL QSYATCVSLT

Arabidopsis Description

AT4g39690/T19P19_80 [Source:UniProtKB/TrEMBL;Acc:Q9ASV5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.