CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d026396_P004	Maize	mitochondrion	91.67	91.81
Zm00001d002145_P001	Maize	mitochondrion	61.06	87.59
TraesCS2D01G529400.1	Wheat	mitochondrion	67.31	69.42
TraesCS2B01G557000.2	Wheat	mitochondrion	67.15	69.26
TraesCS2A01G526700.1	Wheat	mitochondrion	66.83	68.93
HORVU2Hr1G116190.1	Barley	plastid	68.59	63.79
CDY42646	Canola	cytosol	10.58	58.93
Os04t0636600-02	Rice	mitochondrion	34.62	58.54
CDY41998	Canola	extracellular	18.75	49.79
VIT_07s0031g01190.t01	Wine grape	mitochondrion	44.39	41.47
Bra011841.1-P	Field mustard	cytosol, nucleus, peroxisome	13.94	40.47
GSMUA_Achr5P16660_001	Banana	cytosol, extracellular, plastid	38.78	40.4
Solyc04g054470.2.1	Tomato	nucleus	39.26	38.34
AT4G39690.1	Thale cress	mitochondrion	39.26	37.69
KRH59405	Soybean	mitochondrion	38.62	37.6
KRH43245	Soybean	mitochondrion	38.14	36.84
CDY63447	Canola	plastid	37.98	36.57
KRH33115	Soybean	nucleus	14.1	36.21
Bra010667.1-P	Field mustard	plastid	37.66	35.77
CDX90351	Canola	plastid	37.82	35.6

Protein Annotations

MapMan:5.2.3.3.2.1.1	EntrezGene:8068446	UniProt:C5YGR9	ncoils:Coil	EnsemblPlants:EES12936	ProteinID:EES12936
ProteinID:EES12936.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0008150	GO:GO:0008289	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0097035	GO:GO:0098800	GO:GO:1901612
InterPro:Mt-IM_prot_Mitofilin	PFAM:PF09731	PANTHER:PTHR15415	PANTHER:PTHR15415:SF7	EnsemblPlantsGene:SORBI_3006G232800	unigene:Sbi.5968
UniParc:UPI0001A877BA	RefSeq:XP_002448608.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:57508489..57515009

Molecular Weight (calculated)

67924.8 Da

IEP (calculated)

4.923

GRAVY (calculated)

-0.627

Length

624 amino acids

Sequence
(BLAST)

001: MLRRCMRDLR PLRSLARVPR PISGESPTFL KSRSNSTKAS PKSSTQNAAP GPQGQPSQSG SNVSKLVLGT LVVGAAAMGA HQLGYIDLEF KDKKLPFSLK
101: KEDAVKVYED LKIPSEQKVG QTQNVSGPNT EIVQEGNNEA NTPKDVRNDR VGAPEVPTNG DQPVPAEEKK SETLAHETHP VPDEHGSDTK MPSEDSTAFE
201: LKTVPVDDNE SGEVPHEQQT DKADSTVPPV QSTPTTVSTY DHPTGPDVPK DLTGAGAVEQ KSLAETYLLQ DEPDVSKDAT VKEKRSDEVI REKTSEDGKI
301: VLDIIEAIHA AEKKQADVDA YMYSEERRKL KEKYEKELKD TRARELMYAE EAAILDKELK KEKLKNAAAI KELQEKAEQK LQDELQRKDE ETSQQIEKAQ
401: EIAKAELAAA VAKEKASQIE QIAEANLNID ALCMAFYARS EEARQSHSVH KLALGTLALE HALSSGSPIR SEVELLRKSV EGIDKDSLLE LALSSLPEDV
501: LDYGSDTRIG LKQMFNSLKE TIRHFSLLPA GGGGILAHAV ARVASSIKIK GDNAGDGIES LINKVESLIV DGDLSTAADA LEKGLHGTEA EEIATEWVKQ
601: ARKRAIAEQT LALLHACASS TTFS

Best Arabidopsis Sequence Match ( AT4G39690.1 )
(BLAST)

001: MLRKSVLELS SRLSIKRFPR NLGAQRFHLS SSRNASTSGK NGLPGAKPVG KPDASKVDPP KVTPPPPTKG NSSKVVIGGV AIAGAFLVAY QTGYLDQYLG
101: KEQQKLSERI HSDALTEKLE EAHHLNVPSG VEDSTEKDGK VETQPQVTHS EASEGVQSDI ELQPESDLSS DRFTYISSNQ EETPQETVID RAEINLPISA
201: SEDSGAKPDM PSEIISEAES VKLEAVPKPG DSPIIVNAQS SSVHRESETE SASPKDPAAL KTPEDGIERE VQLPGSLLKE YNLEGSDTES TGSSSIGEQI
301: TKETEAFPNS TEGLKDSYMT EDGKLVLDFL AAIHAAEKQQ AHLDAQVFAE ELRALKEKYE NELRDLRARE LMRIEEAAIL DKELKRERTK AAAAIKAIQE
401: RMEDKLKAEL EQKETEAQLA LSKAEELAKA EMISTIAKEK AAQIEKMAEA DLNIKALSMA FYARSEEARQ SHSVHKLALG ALALDDTLSK GLPVQKEIDT
501: LQTYLEGTHK DSILGLVLSS LPEEARSNGT DTVLQLNQKF DTLKGTLRHF SLIPPGGGGI LAHSLAHVAS SLKFKEVDQA NGGIESVIKK VDNYLAEGKL
601: AEAAATLEEG VKGSKAEEIV SDWVRRARNR AITEQALTLL QSYATCVSLT

Arabidopsis Description

AT4g39690/T19P19_80 [Source:UniProtKB/TrEMBL;Acc:Q9ASV5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.