Subcellular Localization
min:
: max
Winner_takes_all: plastid, extracellular, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- extracellular 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY42646 | Canola | cytosol | 9.35 | 50.0 |
| CDY41998 | Canola | extracellular | 16.53 | 42.13 |
| TraesCS2A01G526700.1 | Wheat | mitochondrion | 39.73 | 39.34 |
| TraesCS2D01G529400.1 | Wheat | mitochondrion | 39.57 | 39.17 |
| Zm00001d002145_P001 | Maize | mitochondrion | 28.38 | 39.08 |
| TraesCS2B01G557000.2 | Wheat | mitochondrion | 39.4 | 39.01 |
| EES12936 | Sorghum | mitochondrion | 40.4 | 38.78 |
| Zm00001d026396_P004 | Maize | mitochondrion | 40.07 | 38.52 |
| HORVU2Hr1G116190.1 | Barley | plastid | 40.23 | 35.92 |
| KRH33115 | Soybean | nucleus | 14.19 | 34.98 |
| Bra011841.1-P | Field mustard | cytosol, nucleus, peroxisome | 12.19 | 33.95 |
| VIT_07s0031g01190.t01 | Wine grape | mitochondrion | 37.73 | 33.83 |
| Solyc04g054470.2.1 | Tomato | nucleus | 34.56 | 32.39 |
| KRH59405 | Soybean | mitochondrion | 34.22 | 31.98 |
| KRH43245 | Soybean | mitochondrion | 34.22 | 31.73 |
| Os04t0636600-02 | Rice | mitochondrion | 19.37 | 31.44 |
| AT4G39690.1 | Thale cress | mitochondrion | 33.89 | 31.23 |
| CDY63447 | Canola | plastid | 31.72 | 29.32 |
| CDX90351 | Canola | plastid | 31.89 | 28.81 |
| Bra010667.1-P | Field mustard | plastid | 31.55 | 28.77 |
| GSMUA_Achr5P16670_001 | Banana | cytosol, mitochondrion | 0.5 | 2.46 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr5P16660_001 | EnsemblPlants:GSMUA_Achr5T16660_001 | EnsemblPlantsGene:GSMUA_Achr5G16660_001 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005743 | GO:GO:0016020 | GO:GO:0016021 | InterPro:Mt-IM_prot_Mitofilin |
| ncoils:Coil | PANTHER:PTHR15415 | PANTHER:PTHR15415:SF7 | PFAM:PF09731 | SEG:seg | UniParc:UPI000296221A |
| UniProt:M0SZ45 | MapMan:5.2.3.3.2.1.1 | : | : | : | : |
Description
Putative expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr5G16660_001]
Coordinates
chr5:+:15146913..15158129
Molecular Weight (calculated)
66065.8 Da
IEP (calculated)
4.726
GRAVY (calculated)
-0.502
Length
599 amino acids
Sequence
(BLAST)
(BLAST)
001: MSEIKARYES KLASLVSAVM LTRPNPARLF CHVCRNGPKR VSFALIKRSL RQIFHILLPS DSPSFPVMLR RCIWELSSRR ATSRIHRRIA PQISVYLSSR
101: SQFSSAPPQN SLQGSATADN ASHSRSYISK LVLGSVVIGA AITAAYKTGY IDIQVKDDKS SPNSSKLNAA KDSKDLELSV EQAVLLSNEE TSTLEPDIEI
201: VEKSDEPQGQ EFEIKGEAIL ERVPLEETAP LKENEPTEVD SKIPSEVSSS VADEQKADSE VSSEGTTLDD ILVSTEVTVE QNKSNETSKE NIGEESQVSE
301: EAVLKEAPIK VAMQDSADTE EGPYKSLSES YSLQDEGSQK ISREEINTDA VATFSTIKEG YIGATEQVRD EESSKDGKIV LDLIEAIHAA EKKQAESDAF
401: VFAEEKRVLK EKYEKQLKDA KARALMYAEE AAILEKELNR EKAKAAAAIK SLQEKSENKL REELQRKDEE TDTQLKKVKE LSKAELAAAI AKEKSSQIEK
501: IAEADLNINA LCMAFYARSE EARQTHSVHK LALGTLALED ALSRGLPIRA EVDALLKSLE GIDKDSLVEL ALSCLPEEIL NNGTSTQMQL NQKASQIWC
101: SQFSSAPPQN SLQGSATADN ASHSRSYISK LVLGSVVIGA AITAAYKTGY IDIQVKDDKS SPNSSKLNAA KDSKDLELSV EQAVLLSNEE TSTLEPDIEI
201: VEKSDEPQGQ EFEIKGEAIL ERVPLEETAP LKENEPTEVD SKIPSEVSSS VADEQKADSE VSSEGTTLDD ILVSTEVTVE QNKSNETSKE NIGEESQVSE
301: EAVLKEAPIK VAMQDSADTE EGPYKSLSES YSLQDEGSQK ISREEINTDA VATFSTIKEG YIGATEQVRD EESSKDGKIV LDLIEAIHAA EKKQAESDAF
401: VFAEEKRVLK EKYEKQLKDA KARALMYAEE AAILEKELNR EKAKAAAAIK SLQEKSENKL REELQRKDEE TDTQLKKVKE LSKAELAAAI AKEKSSQIEK
501: IAEADLNINA LCMAFYARSE EARQTHSVHK LALGTLALED ALSRGLPIRA EVDALLKSLE GIDKDSLVEL ALSCLPEEIL NNGTSTQMQL NQKASQIWC
001: MLRKSVLELS SRLSIKRFPR NLGAQRFHLS SSRNASTSGK NGLPGAKPVG KPDASKVDPP KVTPPPPTKG NSSKVVIGGV AIAGAFLVAY QTGYLDQYLG
101: KEQQKLSERI HSDALTEKLE EAHHLNVPSG VEDSTEKDGK VETQPQVTHS EASEGVQSDI ELQPESDLSS DRFTYISSNQ EETPQETVID RAEINLPISA
201: SEDSGAKPDM PSEIISEAES VKLEAVPKPG DSPIIVNAQS SSVHRESETE SASPKDPAAL KTPEDGIERE VQLPGSLLKE YNLEGSDTES TGSSSIGEQI
301: TKETEAFPNS TEGLKDSYMT EDGKLVLDFL AAIHAAEKQQ AHLDAQVFAE ELRALKEKYE NELRDLRARE LMRIEEAAIL DKELKRERTK AAAAIKAIQE
401: RMEDKLKAEL EQKETEAQLA LSKAEELAKA EMISTIAKEK AAQIEKMAEA DLNIKALSMA FYARSEEARQ SHSVHKLALG ALALDDTLSK GLPVQKEIDT
501: LQTYLEGTHK DSILGLVLSS LPEEARSNGT DTVLQLNQKF DTLKGTLRHF SLIPPGGGGI LAHSLAHVAS SLKFKEVDQA NGGIESVIKK VDNYLAEGKL
601: AEAAATLEEG VKGSKAEEIV SDWVRRARNR AITEQALTLL QSYATCVSLT
101: KEQQKLSERI HSDALTEKLE EAHHLNVPSG VEDSTEKDGK VETQPQVTHS EASEGVQSDI ELQPESDLSS DRFTYISSNQ EETPQETVID RAEINLPISA
201: SEDSGAKPDM PSEIISEAES VKLEAVPKPG DSPIIVNAQS SSVHRESETE SASPKDPAAL KTPEDGIERE VQLPGSLLKE YNLEGSDTES TGSSSIGEQI
301: TKETEAFPNS TEGLKDSYMT EDGKLVLDFL AAIHAAEKQQ AHLDAQVFAE ELRALKEKYE NELRDLRARE LMRIEEAAIL DKELKRERTK AAAAIKAIQE
401: RMEDKLKAEL EQKETEAQLA LSKAEELAKA EMISTIAKEK AAQIEKMAEA DLNIKALSMA FYARSEEARQ SHSVHKLALG ALALDDTLSK GLPVQKEIDT
501: LQTYLEGTHK DSILGLVLSS LPEEARSNGT DTVLQLNQKF DTLKGTLRHF SLIPPGGGGI LAHSLAHVAS SLKFKEVDQA NGGIESVIKK VDNYLAEGKL
601: AEAAATLEEG VKGSKAEEIV SDWVRRARNR AITEQALTLL QSYATCVSLT
Arabidopsis Description
AT4g39690/T19P19_80 [Source:UniProtKB/TrEMBL;Acc:Q9ASV5]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.