CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH43245	Soybean	mitochondrion	75.31	28.33
KRH59405	Soybean	mitochondrion	72.43	27.46
Zm00001d002145_P001	Maize	mitochondrion	32.1	17.93
CDY41998	Canola	extracellular	16.46	17.02
VIT_07s0031g01190.t01	Wine grape	mitochondrion	44.03	16.02
Bra011841.1-P	Field mustard	cytosol, nucleus, peroxisome	13.99	15.81
AT4G39690.1	Thale cress	mitochondrion	41.98	15.69
Solyc04g054470.2.1	Tomato	nucleus	40.33	15.34
CDY63447	Canola	plastid	40.74	15.28
Bra010667.1-P	Field mustard	plastid	40.33	14.92
TraesCS2B01G557000.2	Wheat	mitochondrion	37.04	14.88
TraesCS2D01G529400.1	Wheat	mitochondrion	37.04	14.88
CDX90351	Canola	plastid	39.92	14.63
TraesCS2A01G526700.1	Wheat	mitochondrion	35.8	14.38
GSMUA_Achr5P16660_001	Banana	cytosol, extracellular, plastid	34.98	14.19
EES12936	Sorghum	mitochondrion	36.21	14.1
Zm00001d026396_P004	Maize	mitochondrion	35.8	13.96
HORVU2Hr1G116190.1	Barley	plastid	37.04	13.41
Os04t0636600-02	Rice	mitochondrion	15.64	10.3
GSMUA_Achr5P16670_001	Banana	cytosol, mitochondrion	3.29	6.56
CDY42646	Canola	cytosol	0.82	1.79

Protein Annotations

EMBL:ACUP02006358	EnsemblPlants:KRH33115	EnsemblPlantsGene:GLYMA_10G100900	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0016020	GO:GO:0016021	InterPro:Mt-IM_prot_Mitofilin
ncoils:Coil	PFAM:PF09731	ProteinID:KRH33115	ProteinID:KRH33115.1	SEG:seg	UniParc:UPI0006EDC18B
UniProt:A0A0R0I0C2	MapMan:5.2.3.3.2.1.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:18839511..18841947

Molecular Weight (calculated)

27696.4 Da

IEP (calculated)

7.218

GRAVY (calculated)

-0.663

Length

243 amino acids

Sequence
(BLAST)

001: MKNIQPEQLE VQEMGRRESA LGKDIEQQPT LLEEYQLRNK SERSPATYIS SHGFIENSHF PEGKEALNGA MEELKDGYIY ENGKLVVHFL QAIHAAEKRQ
101: ADLDVHVSNE QKKLLKKLKD VAARELMLAE EAAMLDRELK RERAKASLAI KALRQKMEDK LKTELEQKEI ETDLKLKQTQ ELAKAYLNTT IANENAAIAN
201: ENAAQIQKMA EANVNVRFLL KSKMGNRDCV IKHAHKMVMV CEA

Best Arabidopsis Sequence Match ( AT4G39690.1 )
(BLAST)

001: MLRKSVLELS SRLSIKRFPR NLGAQRFHLS SSRNASTSGK NGLPGAKPVG KPDASKVDPP KVTPPPPTKG NSSKVVIGGV AIAGAFLVAY QTGYLDQYLG
101: KEQQKLSERI HSDALTEKLE EAHHLNVPSG VEDSTEKDGK VETQPQVTHS EASEGVQSDI ELQPESDLSS DRFTYISSNQ EETPQETVID RAEINLPISA
201: SEDSGAKPDM PSEIISEAES VKLEAVPKPG DSPIIVNAQS SSVHRESETE SASPKDPAAL KTPEDGIERE VQLPGSLLKE YNLEGSDTES TGSSSIGEQI
301: TKETEAFPNS TEGLKDSYMT EDGKLVLDFL AAIHAAEKQQ AHLDAQVFAE ELRALKEKYE NELRDLRARE LMRIEEAAIL DKELKRERTK AAAAIKAIQE
401: RMEDKLKAEL EQKETEAQLA LSKAEELAKA EMISTIAKEK AAQIEKMAEA DLNIKALSMA FYARSEEARQ SHSVHKLALG ALALDDTLSK GLPVQKEIDT
501: LQTYLEGTHK DSILGLVLSS LPEEARSNGT DTVLQLNQKF DTLKGTLRHF SLIPPGGGGI LAHSLAHVAS SLKFKEVDQA NGGIESVIKK VDNYLAEGKL
601: AEAAATLEEG VKGSKAEEIV SDWVRRARNR AITEQALTLL QSYATCVSLT

Arabidopsis Description

AT4g39690/T19P19_80 [Source:UniProtKB/TrEMBL;Acc:Q9ASV5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.