Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- nucleus 2
- endoplasmic reticulum 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90351 | Canola | plastid | 90.41 | 89.59 |
| AT4G39690.1 | Thale cress | mitochondrion | 69.56 | 70.31 |
| Bra011841.1-P | Field mustard | cytosol, nucleus, peroxisome | 22.22 | 67.91 |
| GSMUA_Achr5P16670_001 | Banana | cytosol, mitochondrion | 11.26 | 60.66 |
| KRH59405 | Soybean | mitochondrion | 44.29 | 45.4 |
| KRH43245 | Soybean | mitochondrion | 43.68 | 44.43 |
| VIT_07s0031g01190.t01 | Wine grape | mitochondrion | 43.68 | 42.96 |
| Solyc04g054470.2.1 | Tomato | nucleus | 41.25 | 42.41 |
| KRH33115 | Soybean | nucleus | 14.92 | 40.33 |
| TraesCS2D01G529400.1 | Wheat | mitochondrion | 35.92 | 39.01 |
| TraesCS2A01G526700.1 | Wheat | mitochondrion | 35.77 | 38.84 |
| TraesCS2B01G557000.2 | Wheat | mitochondrion | 35.46 | 38.51 |
| Zm00001d026396_P004 | Maize | mitochondrion | 35.77 | 37.72 |
| EES12936 | Sorghum | mitochondrion | 35.77 | 37.66 |
| HORVU2Hr1G116190.1 | Barley | plastid | 36.23 | 35.47 |
| GSMUA_Achr5P16660_001 | Banana | cytosol, extracellular, plastid | 28.77 | 31.55 |
| Zm00001d002145_P001 | Maize | mitochondrion | 19.18 | 28.97 |
| Os04t0636600-02 | Rice | mitochondrion | 12.94 | 23.04 |
Protein Annotations
| EnsemblPlants:Bra010667.1 | EnsemblPlants:Bra010667.1-P | EnsemblPlantsGene:Bra010667 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005743 | GO:GO:0016020 | GO:GO:0016021 | InterPro:Mt-IM_prot_Mitofilin |
| ncoils:Coil | PANTHER:PTHR15415 | PANTHER:PTHR15415:SF7 | PFAM:PF09731 | SEG:seg | UniParc:UPI0002546791 |
| UniProt:M4D2G7 | MapMan:5.2.3.3.2.1.1 | : | : | : | : |
Description
AT4G39690 (E=3e-235) | unknown protein
Coordinates
chrA08:-:15877551..15881257
Molecular Weight (calculated)
70593.7 Da
IEP (calculated)
4.829
GRAVY (calculated)
-0.538
Length
657 amino acids
Sequence
(BLAST)
(BLAST)
001: MEISQCCTDS LVVAKSNSRR SVLELSIKRF PRNLGAAQRF HLRKASSTSG KNGVPGAKPL GKPDASKVPP PPSDGSKGGS SKVVIGGAAI AGAFLVAYQT
101: GYLDQYLGNE TQKLSELVKS DAITEKLEES HHSSVSPGVG DSAGIGSSGD GKGETQPEVP ASVGIQSDIE VQPESDPTPD RYTYVSSNQQ ETPQDNGADK
201: AEKSLPLSSD DSKTKSDASP EIISEAENVK LEAVPKPEDS TVISPQPGSV LNESEVESAA SKDPATEKAS EDGIEREVKT PGSLLKEYNL DGNGTESNGS
301: SPAGEQLTNE TEALPNSTEG LKDGYMTQDG KLVLDFLDAI HAAEERQSHL EAQVFAEKLR TLKEKYENEL RDLRARELMR IEEAAILDKE LKREKTKAAA
401: AIKSIQERME DKLKTEIEQK ESEAQLALSK AEEMAKAELT AAIVKEKAAQ IEKMAEADLN IKALHMAFYA RSEEARKSHS VHKLALGALA LEDSLSKGLP
501: IHKEISMLQS YLEGTHEDSV LDLVLSSLPE EAKSKGTDTT LQLNQKFDTL KGTLRHFSLI PPGGGGILAH SLAHIASWLK FKEVDQANGG IESVIKKVDN
601: YLAEEKLAEA AAALEEGVKG SKAEEVVSEW VRLARNRAIT EQAVTVLRSY ATCASLT
101: GYLDQYLGNE TQKLSELVKS DAITEKLEES HHSSVSPGVG DSAGIGSSGD GKGETQPEVP ASVGIQSDIE VQPESDPTPD RYTYVSSNQQ ETPQDNGADK
201: AEKSLPLSSD DSKTKSDASP EIISEAENVK LEAVPKPEDS TVISPQPGSV LNESEVESAA SKDPATEKAS EDGIEREVKT PGSLLKEYNL DGNGTESNGS
301: SPAGEQLTNE TEALPNSTEG LKDGYMTQDG KLVLDFLDAI HAAEERQSHL EAQVFAEKLR TLKEKYENEL RDLRARELMR IEEAAILDKE LKREKTKAAA
401: AIKSIQERME DKLKTEIEQK ESEAQLALSK AEEMAKAELT AAIVKEKAAQ IEKMAEADLN IKALHMAFYA RSEEARKSHS VHKLALGALA LEDSLSKGLP
501: IHKEISMLQS YLEGTHEDSV LDLVLSSLPE EAKSKGTDTT LQLNQKFDTL KGTLRHFSLI PPGGGGILAH SLAHIASWLK FKEVDQANGG IESVIKKVDN
601: YLAEEKLAEA AAALEEGVKG SKAEEVVSEW VRLARNRAIT EQAVTVLRSY ATCASLT
001: MLRKSVLELS SRLSIKRFPR NLGAQRFHLS SSRNASTSGK NGLPGAKPVG KPDASKVDPP KVTPPPPTKG NSSKVVIGGV AIAGAFLVAY QTGYLDQYLG
101: KEQQKLSERI HSDALTEKLE EAHHLNVPSG VEDSTEKDGK VETQPQVTHS EASEGVQSDI ELQPESDLSS DRFTYISSNQ EETPQETVID RAEINLPISA
201: SEDSGAKPDM PSEIISEAES VKLEAVPKPG DSPIIVNAQS SSVHRESETE SASPKDPAAL KTPEDGIERE VQLPGSLLKE YNLEGSDTES TGSSSIGEQI
301: TKETEAFPNS TEGLKDSYMT EDGKLVLDFL AAIHAAEKQQ AHLDAQVFAE ELRALKEKYE NELRDLRARE LMRIEEAAIL DKELKRERTK AAAAIKAIQE
401: RMEDKLKAEL EQKETEAQLA LSKAEELAKA EMISTIAKEK AAQIEKMAEA DLNIKALSMA FYARSEEARQ SHSVHKLALG ALALDDTLSK GLPVQKEIDT
501: LQTYLEGTHK DSILGLVLSS LPEEARSNGT DTVLQLNQKF DTLKGTLRHF SLIPPGGGGI LAHSLAHVAS SLKFKEVDQA NGGIESVIKK VDNYLAEGKL
601: AEAAATLEEG VKGSKAEEIV SDWVRRARNR AITEQALTLL QSYATCVSLT
101: KEQQKLSERI HSDALTEKLE EAHHLNVPSG VEDSTEKDGK VETQPQVTHS EASEGVQSDI ELQPESDLSS DRFTYISSNQ EETPQETVID RAEINLPISA
201: SEDSGAKPDM PSEIISEAES VKLEAVPKPG DSPIIVNAQS SSVHRESETE SASPKDPAAL KTPEDGIERE VQLPGSLLKE YNLEGSDTES TGSSSIGEQI
301: TKETEAFPNS TEGLKDSYMT EDGKLVLDFL AAIHAAEKQQ AHLDAQVFAE ELRALKEKYE NELRDLRARE LMRIEEAAIL DKELKRERTK AAAAIKAIQE
401: RMEDKLKAEL EQKETEAQLA LSKAEELAKA EMISTIAKEK AAQIEKMAEA DLNIKALSMA FYARSEEARQ SHSVHKLALG ALALDDTLSK GLPVQKEIDT
501: LQTYLEGTHK DSILGLVLSS LPEEARSNGT DTVLQLNQKF DTLKGTLRHF SLIPPGGGGI LAHSLAHVAS SLKFKEVDQA NGGIESVIKK VDNYLAEGKL
601: AEAAATLEEG VKGSKAEEIV SDWVRRARNR AITEQALTLL QSYATCVSLT
Arabidopsis Description
AT4g39690/T19P19_80 [Source:UniProtKB/TrEMBL;Acc:Q9ASV5]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.