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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 3
  • cytosol 1
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2B01G557000.2 Wheat mitochondrion 81.97 90.91
TraesCS2D01G529400.1 Wheat mitochondrion 81.67 90.58
TraesCS2A01G526700.1 Wheat mitochondrion 80.78 89.59
EES12936 Sorghum mitochondrion 63.79 68.59
Zm00001d026396_P004 Maize mitochondrion 61.1 65.81
CDY42646 Canola cytosol 10.43 62.5
Zm00001d002145_P001 Maize mitochondrion 38.3 59.08
Os04t0636600-02 Rice mitochondrion 31.89 57.99
CDY41998 Canola extracellular 18.33 52.34
Bra011841.1-P Field mustard cytosol, nucleus, peroxisome 13.86 43.26
VIT_07s0031g01190.t01 Wine grape mitochondrion 40.39 40.57
GSMUA_Achr5P16660_001 Banana cytosol, extracellular, plastid 35.92 40.23
Solyc04g054470.2.1 Tomato nucleus 37.56 39.44
KRH59405 Soybean mitochondrion 36.96 38.69
AT4G39690.1 Thale cress mitochondrion 36.96 38.15
KRH43245 Soybean mitochondrion 36.66 38.08
KRH33115 Soybean nucleus 13.41 37.04
CDY63447 Canola plastid 35.47 36.73
Bra010667.1-P Field mustard plastid 35.47 36.23
CDX90351 Canola plastid 35.77 36.2
Protein Annotations
MapMan:5.2.3.3.2.1.1ncoils:CoilGO:GO:0003674GO:GO:0005488GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005739GO:GO:0005743GO:GO:0008150GO:GO:0008289
GO:GO:0009987GO:GO:0016020GO:GO:0016043GO:GO:0097035GO:GO:0098800GO:GO:1901612
EnsemblPlantsGene:HORVU2Hr1G116190EnsemblPlants:HORVU2Hr1G116190.1InterPro:Mt-IM_prot_MitofilinPFAM:PF09731PANTHER:PTHR15415PANTHER:PTHR15415:SF7
SEG:seg:::::
Description
No Description!
Coordinates
chrchr2H:+:737171325..737179349
Molecular Weight (calculated)
73014.1 Da
IEP (calculated)
5.299
GRAVY (calculated)
-0.665
Length
671 amino acids
Sequence
(BLAST)
001: PGRVTRPSSP FSPRRPPPSP RRRRPPPAAQ GGDPAGRSEP RRSSASSTLP GGEQTERRRP PPASPAMLRR CVRDLYPLRS LRRIPRPISG EAQSPTFLQS
101: RRNSTKAPQQ GSAQKSVPGP KEEPSQSGSK FPKFVLGTLV VGAAGMAAYQ AGYIDLPFMD EKLPSTIREQ NFTKMYENMK SPFEQKVDQK QTMLDPSNGI
201: VQDKPKDLPA EGIPTAGEQP TPAEEKETET VTQGTLPVQD ERGADTKLPS QDTLSFDIKP TVVNDGAAGE VPPGQADKIS STVSPVESSP TTAEVQKDPL
301: GADVGEQKSL AETYLLQVEH DIPKDESAKE TRSDGVVGVK AYDDGKLMLD IIDAIHAAEK KQADTDAYMY SEEKRKLKER YEKELKDTRA RELMYAEEAA
401: ILDKELKKEK IKAAAAVKEL QEKTEQKLVD ELQRKDEEAS QQVEKVQELA KAELAAALAK EKASQIEQIA EADINIDALC MAFYARSEEA RQSHSVHKLA
501: LGTLAFEEAL SSGSPIRTEV DQLRKSLEGI DKDSLLDLAL SSLPEDVLDH GSDTRMELKQ KFNSLKETIR HFSLIPPGGG GMLTHAVARA ASKIKVKEDQ
601: SGDGVEALIS RVEDLIVGGD LSAAADALTG GLLGTAAEEA ATEWVKQARK RAIAEQTLTL LHSYASSITF S
Best Arabidopsis Sequence Match ( AT4G39690.1 )
(BLAST)
001: MLRKSVLELS SRLSIKRFPR NLGAQRFHLS SSRNASTSGK NGLPGAKPVG KPDASKVDPP KVTPPPPTKG NSSKVVIGGV AIAGAFLVAY QTGYLDQYLG
101: KEQQKLSERI HSDALTEKLE EAHHLNVPSG VEDSTEKDGK VETQPQVTHS EASEGVQSDI ELQPESDLSS DRFTYISSNQ EETPQETVID RAEINLPISA
201: SEDSGAKPDM PSEIISEAES VKLEAVPKPG DSPIIVNAQS SSVHRESETE SASPKDPAAL KTPEDGIERE VQLPGSLLKE YNLEGSDTES TGSSSIGEQI
301: TKETEAFPNS TEGLKDSYMT EDGKLVLDFL AAIHAAEKQQ AHLDAQVFAE ELRALKEKYE NELRDLRARE LMRIEEAAIL DKELKRERTK AAAAIKAIQE
401: RMEDKLKAEL EQKETEAQLA LSKAEELAKA EMISTIAKEK AAQIEKMAEA DLNIKALSMA FYARSEEARQ SHSVHKLALG ALALDDTLSK GLPVQKEIDT
501: LQTYLEGTHK DSILGLVLSS LPEEARSNGT DTVLQLNQKF DTLKGTLRHF SLIPPGGGGI LAHSLAHVAS SLKFKEVDQA NGGIESVIKK VDNYLAEGKL
601: AEAAATLEEG VKGSKAEEIV SDWVRRARNR AITEQALTLL QSYATCVSLT
Arabidopsis Description
AT4g39690/T19P19_80 [Source:UniProtKB/TrEMBL;Acc:Q9ASV5]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.