Factsheet for Zm00001d026396_P004

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

extracellular: 20408568
plastid: 23198870
plasma membrane: 23508561
mitochondrion: 27297264
plasma membrane: 27341663
mitochondrion: 29575040

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 29575040 doi

WQ Wang, Y Wang, Q Zhang, IM Møller, SQ Song

Department of Molecular Biology and Genetics, Aarhus University, DK-4200 Slagelse, Denmark., Key Laboratory of Plant Molecular Physiology, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China., Key Laboratory of Plant Resources and Beijing Botanical Garden, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

msms PMID: 23508561 doi

Z Zhang, P Voothuluru, M Yamaguchi, RE Sharp, SC Peck

Division of Biochemistry, University of Missouri Columbia, MO, USA ; Christopher S. Bond Life Sciences Center, University of Missouri Columbia, MO, USA ; Interdisciplinary Plant Group, University of Missouri Columbia, MO, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES12936	Sorghum	mitochondrion	91.81	91.67
Zm00001d002145_P001	Maize	mitochondrion	60.03	85.98
TraesCS2D01G529400.1	Wheat	mitochondrion	65.65	67.6
TraesCS2B01G557000.2	Wheat	mitochondrion	65.49	67.44
TraesCS2A01G526700.1	Wheat	mitochondrion	65.33	67.27
HORVU2Hr1G116190.1	Barley	plastid	65.81	61.1
CDY42646	Canola	cytosol	10.43	58.04
Os04t0636600-02	Rice	mitochondrion	33.23	56.1
CDY41998	Canola	extracellular	18.62	49.36
VIT_07s0031g01190.t01	Wine grape	mitochondrion	44.3	41.32
Bra011841.1-P	Field mustard	cytosol, nucleus, peroxisome	14.13	40.93
GSMUA_Achr5P16660_001	Banana	cytosol, extracellular, plastid	38.52	40.07
Solyc04g054470.2.1	Tomato	nucleus	39.81	38.81
KRH59405	Soybean	mitochondrion	39.17	38.07
AT4G39690.1	Thale cress	mitochondrion	39.0	37.38
KRH43245	Soybean	mitochondrion	38.52	37.15
CDY63447	Canola	plastid	37.88	36.42
KRH33115	Soybean	nucleus	13.96	35.8
Bra010667.1-P	Field mustard	plastid	37.72	35.77
CDX90351	Canola	plastid	37.88	35.6

Protein Annotations

EMBL:BT067433	EnsemblPlants:Zm00001d026396_P004	EnsemblPlants:Zm00001d026396_T004	EnsemblPlantsGene:Zm00001d026396	EntrezGene:100383507	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0016020
GO:GO:0016021	InterPro:Mt-IM_prot_Mitofilin	ncoils:Coil	PANTHER:PTHR15415	PANTHER:PTHR15415:SF7	PFAM:PF09731
ProteinID:AQK46476.1	SEG:seg	UniParc:UPI000195CBFD	UniProt:C0PGL4	MapMan:5.2.3.3.2.1.1	:

Description

Formation of crista junctions protein 1

Coordinates

chr10:-:145140886..145148850

Molecular Weight (calculated)

68271.3 Da

IEP (calculated)

4.880

GRAVY (calculated)

-0.599

Length

623 amino acids

Sequence
(BLAST)

001: MLRRCMRDLR SPRSLARVSR PISVESPTFL KSRSNSTKAS PKSSQNAAPG PQGQPSQSGS NVSKIVLGTL VVGAAAMGAH QLGYIDLQFR DKKFPFSLKK
101: EDVVKVYEDL KIPSEQKVDQ TQNVSGQNAE IVQENNNEAH TPKGVLNDGM GALEVPINED QLVPAEEKKS QTLAHETHPV PDEHGSDTKM PSEDSLAVEI
201: ETVPIDANES SEVPHEQQTD RIDSTIPPTQ STPTTVSTYD HPTDPDAPKD LSGAGAVEQK SLAETYFLQD EPDVSKDATI KEKRSDEVIR EKTSKDGKIV
301: LDIIEAIHAA EKKQADVDAY MYSEERRKLK EKYEKELKDT RARELMYAEE AAILDKELKK EKLKNAAALK ELQEKAEQKL QDELQRKDEE TSQQIEKAQE
401: IAKAELAAAV AKEKASQIEQ IAEANLNIDA LCMAFYARSE ETRQSHSVHK LALGTLALEH ALSSGSPIRS EVELLRKSVE GIDKDSLLEL ALSSLPEDVL
501: DYGSDTMMGL KQKFNSLKET IRHFSLLPAG GGGILAHTVA RVASSIKIKG DNSGDGIESL INKVERLIVD GDLITAADAL EQGLHGTEAE EIATEWVKQA
601: RKRAIAEQTL ALLQACASST TFS

Best Arabidopsis Sequence Match ( AT4G39690.1 )
(BLAST)

001: MLRKSVLELS SRLSIKRFPR NLGAQRFHLS SSRNASTSGK NGLPGAKPVG KPDASKVDPP KVTPPPPTKG NSSKVVIGGV AIAGAFLVAY QTGYLDQYLG
101: KEQQKLSERI HSDALTEKLE EAHHLNVPSG VEDSTEKDGK VETQPQVTHS EASEGVQSDI ELQPESDLSS DRFTYISSNQ EETPQETVID RAEINLPISA
201: SEDSGAKPDM PSEIISEAES VKLEAVPKPG DSPIIVNAQS SSVHRESETE SASPKDPAAL KTPEDGIERE VQLPGSLLKE YNLEGSDTES TGSSSIGEQI
301: TKETEAFPNS TEGLKDSYMT EDGKLVLDFL AAIHAAEKQQ AHLDAQVFAE ELRALKEKYE NELRDLRARE LMRIEEAAIL DKELKRERTK AAAAIKAIQE
401: RMEDKLKAEL EQKETEAQLA LSKAEELAKA EMISTIAKEK AAQIEKMAEA DLNIKALSMA FYARSEEARQ SHSVHKLALG ALALDDTLSK GLPVQKEIDT
501: LQTYLEGTHK DSILGLVLSS LPEEARSNGT DTVLQLNQKF DTLKGTLRHF SLIPPGGGGI LAHSLAHVAS SLKFKEVDQA NGGIESVIKK VDNYLAEGKL
601: AEAAATLEEG VKGSKAEEIV SDWVRRARNR AITEQALTLL QSYATCVSLT

Arabidopsis Description

AT4g39690/T19P19_80 [Source:UniProtKB/TrEMBL;Acc:Q9ASV5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.