CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY42646	Canola	cytosol	40.0	83.93
GSMUA_Achr5P16670_001	Banana	cytosol, mitochondrion	15.32	29.51
AT4G39690.1	Thale cress	mitochondrion	74.04	26.77
CDY63447	Canola	plastid	72.34	26.23
CDX90351	Canola	plastid	72.77	25.79
KRH59405	Soybean	mitochondrion	59.57	21.84
VIT_07s0031g01190.t01	Wine grape	mitochondrion	61.28	21.56
Solyc04g054470.2.1	Tomato	nucleus	57.45	21.13
KRH43245	Soybean	mitochondrion	57.45	20.9
TraesCS2D01G529400.1	Wheat	mitochondrion	51.91	20.17
TraesCS2A01G526700.1	Wheat	mitochondrion	51.06	19.83
TraesCS2B01G557000.2	Wheat	mitochondrion	51.06	19.83
EES12936	Sorghum	mitochondrion	49.79	18.75
Zm00001d026396_P004	Maize	mitochondrion	49.36	18.62
HORVU2Hr1G116190.1	Barley	plastid	52.34	18.33
GSMUA_Achr5P16660_001	Banana	cytosol, extracellular, plastid	42.13	16.53
KRH33115	Soybean	nucleus	17.02	16.46
Zm00001d002145_P001	Maize	mitochondrion	14.47	7.82
Os04t0636600-02	Rice	mitochondrion	3.83	2.44

Protein Annotations

EnsemblPlants:CDY41998	EnsemblPlantsGene:GSBRNA2T00074002001	GO:A0A078HZ52	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0016020	GO:GO:0016021	InterPro:Mt-IM_prot_Mitofilin
ncoils:Coil	PANTHER:PTHR15415	PANTHER:PTHR15415:SF7	PFAM:PF09731	ProteinID:CDY41998	ProteinID:CDY41998.1
SEG:seg	UniParc:UPI0004EE7448	UniProt:A0A078HZ52	MapMan:5.2.3.3.2.1.1	:	:

Description

BnaA01g05700DBnaA01g05700D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HZ52]

Coordinates

chrLK032511:+:232084..233810

Molecular Weight (calculated)

26236.0 Da

IEP (calculated)

7.557

GRAVY (calculated)

-0.179

Length

235 amino acids

Sequence
(BLAST)

001: MTKLSLVIKI LTYDAVWEKL LLRPSLCHSD FQENRKKTKA AAAIKAIQER MEDKLKTEIE QKETEAKLAL SEAEEMAKAE LISAIAKEKI LMIKALCMAF
101: YARSEEARQS HSIHKLALGA LALEDTLSKG LPIQNEIDML QTYLEGIHQD SMLDLVLSSL PEEALSTGTD TVQQLNQKFN TLRGALRHFS LIPPGVKGSK
201: AEEILNAWVR RARNRAITEQ AVTLLQSYAT CASLT

Best Arabidopsis Sequence Match ( AT4G39690.1 )
(BLAST)

001: MLRKSVLELS SRLSIKRFPR NLGAQRFHLS SSRNASTSGK NGLPGAKPVG KPDASKVDPP KVTPPPPTKG NSSKVVIGGV AIAGAFLVAY QTGYLDQYLG
101: KEQQKLSERI HSDALTEKLE EAHHLNVPSG VEDSTEKDGK VETQPQVTHS EASEGVQSDI ELQPESDLSS DRFTYISSNQ EETPQETVID RAEINLPISA
201: SEDSGAKPDM PSEIISEAES VKLEAVPKPG DSPIIVNAQS SSVHRESETE SASPKDPAAL KTPEDGIERE VQLPGSLLKE YNLEGSDTES TGSSSIGEQI
301: TKETEAFPNS TEGLKDSYMT EDGKLVLDFL AAIHAAEKQQ AHLDAQVFAE ELRALKEKYE NELRDLRARE LMRIEEAAIL DKELKRERTK AAAAIKAIQE
401: RMEDKLKAEL EQKETEAQLA LSKAEELAKA EMISTIAKEK AAQIEKMAEA DLNIKALSMA FYARSEEARQ SHSVHKLALG ALALDDTLSK GLPVQKEIDT
501: LQTYLEGTHK DSILGLVLSS LPEEARSNGT DTVLQLNQKF DTLKGTLRHF SLIPPGGGGI LAHSLAHVAS SLKFKEVDQA NGGIESVIKK VDNYLAEGKL
601: AEAAATLEEG VKGSKAEEIV SDWVRRARNR AITEQALTLL QSYATCVSLT

Arabidopsis Description

AT4g39690/T19P19_80 [Source:UniProtKB/TrEMBL;Acc:Q9ASV5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.