Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- cytosol 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX83516 | Canola | plastid | 95.73 | 96.55 |
| CDY14860 | Canola | plastid | 89.74 | 90.52 |
| CDY68147 | Canola | plastid | 85.47 | 86.21 |
| CDY50830 | Canola | plastid | 83.76 | 84.48 |
| AT2G42870.1 | Thale cress | plastid | 77.78 | 77.12 |
| CDX89007 | Canola | plastid | 63.25 | 63.79 |
| CDY00592 | Canola | plastid | 63.25 | 63.79 |
| CDX71918 | Canola | plastid | 55.56 | 60.19 |
| CDY49257 | Canola | plastid | 58.12 | 58.62 |
| Solyc07g056360.1.1 | Tomato | nucleus | 43.59 | 49.04 |
| PGSC0003DMT400044708 | Potato | cytosol | 41.88 | 44.95 |
| KRH73670 | Soybean | plastid | 39.32 | 35.66 |
| KRH14475 | Soybean | nucleus | 41.88 | 35.25 |
| VIT_12s0142g00160.t01 | Wine grape | mitochondrion | 34.19 | 26.49 |
Protein Annotations
| EnsemblPlants:CDY42818 | EnsemblPlantsGene:GSBRNA2T00075499001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 |
| ncoils:Coil | PANTHER:PTHR33124 | PANTHER:PTHR33124:SF3 | ProteinID:CDY42818 | ProteinID:CDY42818.1 | SEG:seg |
| UniParc:UPI0004EBAAC1 | UniProt:A0A078I143 | MapMan:15.5.32 | : | : | : |
Description
BnaC03g23880DBnaC03g23880D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I143]
Coordinates
chrLK032535:+:172664..173017
Molecular Weight (calculated)
12961.5 Da
IEP (calculated)
5.001
GRAVY (calculated)
-0.456
Length
117 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKTLATSDN TRSISVLSSA AVKSRDAGFE RRTKRRLSQT KASVCVSGEE EDDEEEELKE KIEALQRIIP GGTALGVDAL FEETAGYIMS LQCQIKTIKV
101: LTSFIQRLDK QDMKFGG
101: LTSFIQRLDK QDMKFGG
001: MEETLATPDA TRRSLSPSCS ATVKSRAAGF ERRTKRRLSE TNASVREDRE EAEEEEDEVK EKIEALQRII PGGAALGVDA LFEETAGYIL SLQCQIKTIK
101: VLTSFLQRID QEDMKFGG
101: VLTSFLQRID QEDMKFGG
Arabidopsis Description
PAR1Transcription factor PAR1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJH0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.