CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 1
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra007422.1-P	Field mustard	plastid	98.28	98.28
CDX71918	Canola	plastid	88.79	95.37
CDX89007	Canola	plastid	80.17	80.17
CDY00592	Canola	plastid	80.17	80.17
AT3G58850.1	Thale cress	plastid	77.59	76.27
CDX83516	Canola	plastid	61.21	61.21
CDY14860	Canola	plastid	61.21	61.21
CDY68147	Canola	plastid	61.21	61.21
CDY50830	Canola	plastid	60.34	60.34
CDY42818	Canola	plastid	58.62	58.12
Solyc07g056360.1.1	Tomato	nucleus	41.38	46.15
PGSC0003DMT400044708	Potato	cytosol	41.38	44.04
KRH73670	Soybean	plastid	40.52	36.43
KRH14475	Soybean	nucleus	38.79	32.37
VIT_12s0142g00160.t01	Wine grape	mitochondrion	39.66	30.46

Protein Annotations

EnsemblPlants:CDY49257	EnsemblPlantsGene:GSBRNA2T00092650001	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0046983
PANTHER:PTHR33124	PANTHER:PTHR33124:SF3	ProteinID:CDY49257	ProteinID:CDY49257.1	SEG:seg	UniParc:UPI0004EF4DD2
UniProt:A0A078IH10	MapMan:15.5.32	:	:	:	:

Description

BnaA09g55360DBnaA09g55360D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IH10]

Coordinates

chrLK032820:-:106087..106437

Molecular Weight (calculated)

12700.7 Da

IEP (calculated)

4.342

GRAVY (calculated)

-0.554

Length

116 amino acids

Sequence
(BLAST)

001: MEKTVATSHT KRSSPSPSTT VTARPGGFTR RSRQRLSNAT TSVSESDVED DDEEGVEEKI ETLQTIVPGG TALEVDELFE ETASYILALQ CQIKAIKVLT
101: AFLERCDQND DMKFGG

Best Arabidopsis Sequence Match ( AT3G58850.1 )
(BLAST)

001: MEKTLATSHT KRSSPPSPSS AVNTSSTGFN RRTRQRLSDA TASVSETDVE DEDEDEEGVE EKIEALQTIV PGGTELGVDA LFEETASYIL ALQCQINAIK
101: VLTTFLERCE KKDMKFGG

Arabidopsis Description

PAR2Transcription factor PAR2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXR7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.