Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 4
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P11300_001 | Banana | nucleus | 43.88 | 68.25 |
| AT5G67110.1 | Thale cress | nucleus | 87.76 | 40.95 |
| CDY01438 | Canola | nucleus, plastid | 86.73 | 38.99 |
| CDY12804 | Canola | nucleus, plastid | 85.71 | 38.89 |
| TraesCS6A01G190600.1 | Wheat | nucleus | 50.0 | 37.98 |
| CDY24734 | Canola | plastid | 45.92 | 31.69 |
| KRH04711 | Soybean | plastid | 47.96 | 29.38 |
| Os06t0164400-01 | Rice | cytosol, mitochondrion, nucleus | 53.06 | 26.4 |
| KRH15381 | Soybean | nucleus | 62.24 | 20.54 |
| KRH05665 | Soybean | nucleus | 62.24 | 20.54 |
| OQU75890 | Sorghum | nucleus | 59.18 | 19.93 |
| Os02t0805250-00 | Rice | nucleus | 56.12 | 19.64 |
| CDY65390 | Canola | nucleus | 40.82 | 19.14 |
| KXG31309 | Sorghum | nucleus | 56.12 | 18.84 |
| PGSC0003DMT400020534 | Potato | nucleus | 59.18 | 18.47 |
| Solyc04g078690.2.1 | Tomato | nucleus | 58.16 | 18.15 |
| HORVU6Hr1G088020.4 | Barley | nucleus | 54.08 | 17.91 |
| TraesCS6D01G357700.1 | Wheat | nucleus | 54.08 | 17.85 |
| CDX75629 | Canola | nucleus | 62.24 | 17.63 |
| TraesCS6A01G373500.2 | Wheat | nucleus | 54.08 | 17.49 |
| Zm00001d045212_P001 | Maize | nucleus | 60.2 | 17.4 |
| TraesCS7A01G126900.1 | Wheat | nucleus | 58.16 | 17.22 |
| CDX69281 | Canola | nucleus, plastid | 61.22 | 17.19 |
| TraesCS6B01G411300.1 | Wheat | nucleus | 53.06 | 17.16 |
| CDY20289 | Canola | nucleus | 36.73 | 17.06 |
| CDY44048 | Canola | nucleus, plastid | 59.18 | 17.01 |
| CDY35224 | Canola | nucleus | 44.9 | 16.99 |
| HORVU7Hr1G026560.2 | Barley | nucleus | 58.16 | 16.86 |
| TraesCS7D01G124700.1 | Wheat | nucleus | 58.16 | 16.86 |
| TraesCS7B01G026300.1 | Wheat | nucleus | 58.16 | 16.81 |
| CDY22448 | Canola | nucleus, plastid | 60.2 | 16.76 |
| VIT_18s0001g10270.t01 | Wine grape | nucleus | 62.24 | 16.53 |
| Zm00001d018416_P001 | Maize | mitochondrion | 55.1 | 16.36 |
| GSMUA_Achr10P... | Banana | plastid | 57.14 | 16.33 |
| GSMUA_Achr8P15670_001 | Banana | nucleus | 58.16 | 16.15 |
| CDY67566 | Canola | nucleus, plastid | 41.84 | 14.96 |
| CDY00603 | Canola | nucleus, plastid | 41.84 | 14.96 |
| CDY55014 | Canola | nucleus | 39.8 | 13.49 |
| CDX91917 | Canola | nucleus | 46.94 | 13.26 |
| CDX83214 | Canola | nucleus | 46.94 | 13.22 |
| CDY11836 | Canola | nucleus | 37.76 | 12.94 |
| CDY62262 | Canola | nucleus | 39.8 | 12.91 |
| CDY02785 | Canola | nucleus | 38.78 | 12.84 |
| CDY32733 | Canola | nucleus | 38.78 | 12.58 |
| CDX67873 | Canola | nucleus | 38.78 | 12.38 |
| CDX88653 | Canola | nucleus | 37.76 | 12.33 |
| CDX74328 | Canola | nucleus | 46.94 | 11.89 |
| CDY20290 | Canola | endoplasmic reticulum, extracellular | 24.49 | 11.82 |
| CDY21498 | Canola | nucleus | 45.92 | 11.63 |
| CDX68710 | Canola | nucleus | 38.78 | 11.62 |
| CDY28232 | Canola | nucleus | 38.78 | 11.62 |
| CDY65446 | Canola | nucleus | 38.78 | 11.48 |
| CDY34780 | Canola | nucleus | 38.78 | 11.24 |
| CDX76819 | Canola | nucleus | 38.78 | 11.18 |
| CDY35220 | Canola | nucleus | 41.84 | 11.05 |
| CDY06865 | Canola | nucleus | 39.8 | 10.86 |
| CDY14866 | Canola | nucleus | 43.88 | 10.67 |
| CDY46133 | Canola | nucleus | 20.41 | 10.47 |
| CDY30375 | Canola | nucleus | 42.86 | 10.34 |
| CDX70453 | Canola | nucleus | 42.86 | 10.32 |
| CDY29961 | Canola | nucleus | 42.86 | 10.32 |
| CDY06358 | Canola | nucleus | 51.02 | 10.18 |
| CDX83509 | Canola | nucleus | 42.86 | 10.17 |
| CDY22636 | Canola | nucleus | 50.0 | 9.98 |
| CDY06870 | Canola | nucleus | 45.92 | 9.89 |
| CDX94963 | Canola | nucleus | 50.0 | 9.84 |
| CDY64745 | Canola | nucleus | 50.0 | 9.76 |
| CDX91293 | Canola | nucleus | 29.59 | 9.73 |
| CDY31989 | Canola | nucleus | 46.94 | 9.66 |
| CDY21898 | Canola | nucleus | 29.59 | 9.63 |
| CDY22062 | Canola | nucleus | 29.59 | 9.54 |
| CDY18011 | Canola | nucleus | 29.59 | 9.54 |
| CDY06026 | Canola | nucleus | 42.86 | 9.5 |
| CDX71916 | Canola | nucleus | 42.86 | 9.48 |
| CDY18143 | Canola | nucleus | 29.59 | 9.48 |
| CDY42809 | Canola | nucleus | 39.8 | 9.42 |
| CDX97278 | Canola | nucleus | 28.57 | 9.36 |
| CDX90930 | Canola | nucleus | 29.59 | 9.35 |
| GSMUA_Achr7P20810_001 | Banana | nucleus | 57.14 | 9.35 |
| CDY06867 | Canola | nucleus | 45.92 | 9.34 |
| CDX89919 | Canola | nucleus | 29.59 | 9.32 |
| CDY66254 | Canola | nucleus | 37.76 | 9.25 |
| CDX80064 | Canola | nucleus | 37.76 | 9.25 |
| CDY05725 | Canola | nucleus | 46.94 | 9.07 |
| CDX83349 | Canola | nucleus | 35.71 | 8.66 |
| CDY11401 | Canola | extracellular | 28.57 | 7.95 |
| CDY46132 | Canola | endoplasmic reticulum | 14.29 | 7.95 |
| CDX76616 | Canola | extracellular | 28.57 | 7.82 |
| CDY50911 | Canola | nucleus | 21.43 | 7.75 |
| CDY35222 | Canola | nucleus | 43.88 | 7.45 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | GO:A0A078HFL0 | UniProt:A0A078HFL0 | EnsemblPlants:CDY37185 | ProteinID:CDY37185 |
| ProteinID:CDY37185.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 |
| EnsemblPlantsGene:GSBRNA2T00063470001 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 |
| PANTHER:PTHR12565 | PANTHER:PTHR12565:SF297 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EF177C | InterPro:bHLH_dom |
Description
BnaC02g34930DBnaC02g34930D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HFL0]
Coordinates
chrLK032394:+:109727..110513
Molecular Weight (calculated)
11126.7 Da
IEP (calculated)
10.724
GRAVY (calculated)
-0.407
Length
98 amino acids
Sequence
(BLAST)
(BLAST)
1: MVTTFVARNS LKRNIDAQFH NLSEKASRRR SKINEKMKSL QKLIPNSNKT DKASMLDEAI EYLKQLQLQV QTLAVMNGLG LNSMRLPPEM CFSTGTLL
001: MGDSDVGDRL PPPSSSDELS SFLRQILSRT PTAQPSSPPK STNVSSAETF FPSVSGGAVS SVGYGVSETG QDKYAFEHKR SGAKQRNSLK RNIDAQFHNL
101: SEKKRRSKIN EKMKALQKLI PNSNKTDKAS MLDEAIEYLK QLQLQVQTLA VMNGLGLNPM RLPQVPPPTH TRINETLEQD LNLETLLAAP HSLEPAKTSQ
201: GMCFSTATLL
101: SEKKRRSKIN EKMKALQKLI PNSNKTDKAS MLDEAIEYLK QLQLQVQTLA VMNGLGLNPM RLPQVPPPTH TRINETLEQD LNLETLLAAP HSLEPAKTSQ
201: GMCFSTATLL
Arabidopsis Description
ALCTranscription factor ALC [Source:UniProtKB/Swiss-Prot;Acc:Q9FHA2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.