Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37185 | Canola | mitochondrion | 40.95 | 87.76 |
| Bra012133.1-P | Field mustard | nucleus, plastid | 75.71 | 74.3 |
| CDY01438 | Canola | nucleus, plastid | 76.67 | 73.85 |
| CDY12804 | Canola | nucleus, plastid | 75.71 | 73.61 |
| GSMUA_Achr9P11300_001 | Banana | nucleus | 20.48 | 68.25 |
| CDY24734 | Canola | plastid | 45.71 | 67.61 |
| TraesCS6A01G190600.1 | Wheat | nucleus | 26.19 | 42.64 |
| KRH04711 | Soybean | plastid | 24.29 | 31.88 |
| Os06t0164400-01 | Rice | cytosol, mitochondrion, nucleus | 28.57 | 30.46 |
| KRH05665 | Soybean | nucleus | 36.19 | 25.59 |
| KRH15381 | Soybean | nucleus | 35.71 | 25.25 |
| PGSC0003DMT400020534 | Potato | nucleus | 35.71 | 23.89 |
| Solyc04g078690.2.1 | Tomato | nucleus | 35.71 | 23.89 |
| OQU75890 | Sorghum | nucleus | 31.9 | 23.02 |
| AT4G36930.1 | Thale cress | nucleus | 40.0 | 22.52 |
| VIT_18s0001g10270.t01 | Wine grape | nucleus | 39.52 | 22.49 |
| Os02t0805250-00 | Rice | nucleus | 29.52 | 22.14 |
| KXG31309 | Sorghum | nucleus | 30.0 | 21.58 |
| Zm00001d045212_P001 | Maize | nucleus | 34.76 | 21.53 |
| TraesCS7A01G126900.1 | Wheat | nucleus | 32.38 | 20.54 |
| GSMUA_Achr10P... | Banana | plastid | 33.33 | 20.41 |
| HORVU6Hr1G088020.4 | Barley | nucleus | 28.57 | 20.27 |
| TraesCS7D01G124700.1 | Wheat | nucleus | 32.38 | 20.12 |
| TraesCS7B01G026300.1 | Wheat | nucleus | 32.38 | 20.06 |
| GSMUA_Achr8P15670_001 | Banana | nucleus | 33.33 | 19.83 |
| HORVU7Hr1G026560.2 | Barley | nucleus | 31.9 | 19.82 |
| TraesCS6D01G357700.1 | Wheat | nucleus | 27.14 | 19.19 |
| TraesCS6B01G411300.1 | Wheat | nucleus | 27.62 | 19.14 |
| TraesCS6A01G373500.2 | Wheat | nucleus | 27.62 | 19.14 |
| Zm00001d018416_P001 | Maize | mitochondrion | 28.57 | 18.18 |
| AT5G58010.1 | Thale cress | nucleus | 24.76 | 17.51 |
| AT4G28815.1 | Thale cress | vacuole | 21.43 | 14.66 |
| AT2G24260.1 | Thale cress | nucleus | 24.29 | 14.57 |
| AT4G30980.2 | Thale cress | nucleus, plastid | 24.76 | 14.53 |
| AT4G00050.1 | Thale cress | nucleus | 27.14 | 14.29 |
| AT2G20180.2 | Thale cress | nucleus | 32.38 | 14.23 |
| AT4G28790.1 | Thale cress | nucleus | 26.67 | 13.56 |
| AT3G62090.2 | Thale cress | nucleus | 23.33 | 13.5 |
| AT4G02590.1 | Thale cress | nucleus | 18.57 | 12.58 |
| AT2G46970.1 | Thale cress | nucleus | 24.29 | 12.26 |
| AT2G43010.5 | Thale cress | extracellular, vacuole | 26.19 | 11.65 |
| AT1G03040.3 | Thale cress | nucleus | 18.1 | 11.41 |
| AT3G59060.2 | Thale cress | nucleus | 23.81 | 11.26 |
| GSMUA_Achr7P20810_001 | Banana | nucleus | 31.43 | 11.02 |
| AT4G28800.2 | Thale cress | nucleus | 23.33 | 10.72 |
| AT1G09530.3 | Thale cress | nucleus | 26.67 | 10.69 |
| AT4G28811.1 | Thale cress | nucleus | 25.24 | 9.74 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | EntrezGene:836846 | ProteinID:AED98301.1 | ProteinID:AED98302.1 | ProteinID:AED98303.1 |
| EMBL:AF488605 | Symbol:ALC | ArrayExpress:AT5G67110 | EnsemblPlantsGene:AT5G67110 | RefSeq:AT5G67110 | TAIR:AT5G67110 |
| RefSeq:AT5G67110-TAIR-G | EnsemblPlants:AT5G67110.1 | TAIR:AT5G67110.1 | Unigene:At.28825 | ProteinID:BAB10945.1 | EMBL:BT028946 |
| GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0010047 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | RefSeq:NP_001078810.1 |
| RefSeq:NP_001078811.1 | RefSeq:NP_201512.1 | PFAM:PF00010 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020100 | PO:PO:0025022 | PFscan:PS50888 | PANTHER:PTHR12565 |
| PANTHER:PTHR12565:SF297 | UniProt:Q9FHA2 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI000004005C | InterPro:bHLH_dom |
| SEG:seg | : | : | : | : | : |
Description
ALCTranscription factor ALC [Source:UniProtKB/Swiss-Prot;Acc:Q9FHA2]
Coordinates
chr5:-:26785106..26786431
Molecular Weight (calculated)
22964.3 Da
IEP (calculated)
9.739
GRAVY (calculated)
-0.602
Length
210 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDSDVGDRL PPPSSSDELS SFLRQILSRT PTAQPSSPPK STNVSSAETF FPSVSGGAVS SVGYGVSETG QDKYAFEHKR SGAKQRNSLK RNIDAQFHNL
101: SEKKRRSKIN EKMKALQKLI PNSNKTDKAS MLDEAIEYLK QLQLQVQTLA VMNGLGLNPM RLPQVPPPTH TRINETLEQD LNLETLLAAP HSLEPAKTSQ
201: GMCFSTATLL
101: SEKKRRSKIN EKMKALQKLI PNSNKTDKAS MLDEAIEYLK QLQLQVQTLA VMNGLGLNPM RLPQVPPPTH TRINETLEQD LNLETLLAAP HSLEPAKTSQ
201: GMCFSTATLL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.