Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX74328 | Canola | nucleus | 79.7 | 82.17 |
| Bra000560.1-P | Field mustard | nucleus | 78.95 | 81.19 |
| CDY21498 | Canola | nucleus | 78.7 | 81.14 |
| CDX91917 | Canola | nucleus | 68.42 | 78.67 |
| CDY65390 | Canola | nucleus | 41.1 | 78.47 |
| Bra037312.1-P | Field mustard | nucleus | 41.1 | 78.47 |
| CDX83214 | Canola | nucleus | 68.42 | 78.45 |
| VIT_15s0021g02690.t01 | Wine grape | nucleus | 61.15 | 52.47 |
| KRH75301 | Soybean | nucleus | 58.65 | 51.09 |
| KRG88937 | Soybean | nucleus | 59.15 | 50.75 |
| PGSC0003DMT400066807 | Potato | nucleus | 58.4 | 50.22 |
| Solyc10g018510.1.1 | Tomato | nucleus | 41.85 | 42.71 |
| Os10t0556200-01 | Rice | nucleus | 41.35 | 35.48 |
| Zm00001d029898_P001 | Maize | nucleus | 43.36 | 35.31 |
| TraesCS1B01G226200.2 | Wheat | nucleus | 39.35 | 34.51 |
| HORVU1Hr1G054260.3 | Barley | nucleus | 39.6 | 34.05 |
| TraesCS1D01G215600.2 | Wheat | nucleus | 38.6 | 33.85 |
| TraesCS1A01G212700.1 | Wheat | nucleus | 38.35 | 33.63 |
| OQU92150 | Sorghum | nucleus | 44.86 | 33.33 |
| AT5G67110.1 | Thale cress | nucleus | 14.29 | 27.14 |
| AT3G62090.2 | Thale cress | nucleus | 19.05 | 20.94 |
| AT4G28815.1 | Thale cress | vacuole | 15.29 | 19.87 |
| AT4G36930.1 | Thale cress | nucleus | 18.05 | 19.3 |
| AT2G46970.1 | Thale cress | nucleus | 19.3 | 18.51 |
| AT2G20180.2 | Thale cress | nucleus | 22.06 | 18.41 |
| AT5G58010.1 | Thale cress | nucleus | 13.28 | 17.85 |
| AT4G28790.1 | Thale cress | nucleus | 18.05 | 17.43 |
| AT2G43010.5 | Thale cress | extracellular, vacuole | 19.8 | 16.74 |
| AT2G24260.1 | Thale cress | nucleus | 14.29 | 16.29 |
| AT4G28811.1 | Thale cress | nucleus | 21.8 | 15.99 |
| AT3G59060.2 | Thale cress | nucleus | 17.54 | 15.77 |
| AT4G30980.2 | Thale cress | nucleus, plastid | 14.04 | 15.64 |
| AT1G09530.3 | Thale cress | nucleus | 20.3 | 15.46 |
| AT4G28800.2 | Thale cress | nucleus | 17.54 | 15.32 |
| AT4G02590.1 | Thale cress | nucleus | 11.53 | 14.84 |
| AT1G03040.3 | Thale cress | nucleus | 11.53 | 13.81 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | EntrezGene:828175 | ProteinID:AAC19308.1 | ProteinID:AEE81818.1 | EMBL:AF488561 |
| EMBL:AK117229 | ArrayExpress:AT4G00050 | EnsemblPlantsGene:AT4G00050 | RefSeq:AT4G00050 | TAIR:AT4G00050 | RefSeq:AT4G00050-TAIR-G |
| EnsemblPlants:AT4G00050.1 | TAIR:AT4G00050.1 | EMBL:BT025971 | ProteinID:CAB80763.1 | ncoils:Coil | GO:GO:0000003 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009506 | GO:GO:0009567 |
| GO:GO:0009987 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | RefSeq:NP_191916.3 |
| PFAM:PF00010 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50888 |
| PANTHER:PTHR12565 | PANTHER:PTHR12565:SF173 | UniProt:Q8GZ38 | SMART:SM00353 | SUPFAM:SSF47459 | Symbol:UNE10 |
| UniParc:UPI00000ADD3C | InterPro:bHLH_dom | SEG:seg | : | : | : |
Description
UNE10Transcription factor UNE10 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZ38]
Coordinates
chr4:+:17639..20183
Molecular Weight (calculated)
43367.8 Da
IEP (calculated)
7.554
GRAVY (calculated)
-0.562
Length
399 amino acids
Sequence
(BLAST)
(BLAST)
001: MSQCVPNCHI DDTPAAATTT VRSTTAADIP ILDYEVAELT WENGQLGLHG LGPPRVTASS TKYSTGAGGT LESIVDQATR LPNPKPTDEL VPWFHHRSSR
101: AAMAMDALVP CSNLVHEQQS KPGGVGSTRV GSCSDGRTMG GGKRARVAPE WSGGGSQRLT MDTYDVGFTS TSMGSHDNTI DDHDSVCHSR PQMEDEEEKK
201: AGGKSSVSTK RSRAAAIHNQ SERKRRDKIN QRMKTLQKLV PNSSKTDKAS MLDEVIEYLK QLQAQVSMMS RMNMPSMMLP MAMQQQQQLQ MSLMSNPMGL
301: GMGMGMPGLG LLDLNSMNRA AASAPNIHAN MMPNPFLPMN CPSWDASSND SRFQSPLIPD PMSAFLACST QPTTMEAYSR MATLYQQMQQ QLPPPSNPK
101: AAMAMDALVP CSNLVHEQQS KPGGVGSTRV GSCSDGRTMG GGKRARVAPE WSGGGSQRLT MDTYDVGFTS TSMGSHDNTI DDHDSVCHSR PQMEDEEEKK
201: AGGKSSVSTK RSRAAAIHNQ SERKRRDKIN QRMKTLQKLV PNSSKTDKAS MLDEVIEYLK QLQAQVSMMS RMNMPSMMLP MAMQQQQQLQ MSLMSNPMGL
301: GMGMGMPGLG LLDLNSMNRA AASAPNIHAN MMPNPFLPMN CPSWDASSND SRFQSPLIPD PMSAFLACST QPTTMEAYSR MATLYQQMQQ QLPPPSNPK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.