Factsheet for Zm00001d029898_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d012821_P003
Zm00001d014423_P002
Zm00001d030110_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G00050.1	Zm00001d012821_P003	AT1G32230.1	19548978
AT4G00050.1	Zm00001d014423_P002	AT1G32230.1	19548978
AT4G00050.1	Zm00001d030110_P001	AT1G32230.1	19548978

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d029897_P001	Maize	nucleus	55.51	99.63
OQU92150	Sorghum	nucleus	85.1	77.65
Os10t0556200-01	Rice	nucleus	66.12	69.68
TraesCS1B01G226200.2	Wheat	nucleus	64.29	69.23
TraesCS1D01G215600.2	Wheat	nucleus	63.67	68.57
TraesCS1A01G212700.1	Wheat	nucleus	63.27	68.13
HORVU1Hr1G054260.3	Barley	nucleus	63.88	67.46
AT4G00050.1	Thale cress	nucleus	35.31	43.36
CDX83214	Canola	nucleus	30.61	43.1
CDY65390	Canola	nucleus	18.37	43.06
Bra037312.1-P	Field mustard	nucleus	18.37	43.06
CDX91917	Canola	nucleus	30.0	42.36
CDX74328	Canola	nucleus	32.86	41.6
Bra000560.1-P	Field mustard	nucleus	32.86	41.49
CDY21498	Canola	nucleus	32.04	40.57
VIT_15s0021g02690.t01	Wine grape	nucleus	37.35	39.35
Solyc01g090790.2.1	Tomato	nucleus	34.9	36.85
PGSC0003DMT400066807	Potato	nucleus	34.49	36.42
KRG88937	Soybean	nucleus	34.29	36.13
KRH75301	Soybean	nucleus	33.67	36.03
Solyc10g018510.1.1	Tomato	nucleus	25.71	32.23
Zm00001d002288_P002	Maize	nucleus	9.59	21.96
Zm00001d045212_P001	Maize	nucleus	14.9	21.53
Zm00001d026317_P003	Maize	nucleus, plastid	9.8	20.25
Zm00001d031044_P001	Maize	nucleus	15.92	19.55
Zm00001d018416_P001	Maize	mitochondrion	12.65	18.79
Zm00001d020490_P001	Maize	nucleus	12.86	18.31
Zm00001d024783_P001	Maize	nucleus	17.76	17.23
Zm00001d018967_P001	Maize	nucleus	9.8	16.84
Zm00001d052038_P001	Maize	nucleus	11.43	16.77
Zm00001d034298_P001	Maize	nucleus	14.29	16.59
Zm00001d018374_P001	Maize	nucleus	12.86	16.2
Zm00001d045107_P001	Maize	nucleus	10.82	15.96
Zm00001d013073_P002	Maize	nucleus	9.18	15.79
Zm00001d033267_P001	Maize	nucleus	17.14	15.33
Zm00001d040536_P005	Maize	nucleus	17.55	15.17
Zm00001d008205_P001	Maize	nucleus	17.96	13.79
Zm00001d013130_P001	Maize	nucleus	10.82	13.7
Zm00001d005750_P002	Maize	mitochondrion	11.43	13.69
Zm00001d000291_P001	Maize	nucleus	12.86	13.43
Zm00001d045046_P001	Maize	nucleus	11.63	11.85
Zm00001d037098_P003	Maize	nucleus	11.63	10.94
Zm00001d016873_P001	Maize	nucleus	10.82	10.84

Protein Annotations

EntrezGene:103637653	MapMan:15.5.32	Gene3D:4.10.280.10	UniProt:A0A1D6K8G4	ncoils:Coil	GO:GO:0000003
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0008150	GO:GO:0009506
GO:GO:0009567	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	ProteinID:ONL99813.1
PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR12565	PANTHER:PTHR12565:SF173	SMART:SM00353	SUPFAM:SSF47459
UniParc:UPI0004DEA45C	EnsemblPlantsGene:Zm00001d029898	EnsemblPlants:Zm00001d029898_P001	EnsemblPlants:Zm00001d029898_T001	InterPro:bHLH_dom	SEG:seg

Description

Transcription factor UNE10

Coordinates

chr1:+:93133919..93138777

Molecular Weight (calculated)

51234.2 Da

IEP (calculated)

6.709

GRAVY (calculated)

-0.472

Length

490 amino acids

Sequence
(BLAST)

001: MNQCVPSWDL VDDPTAAVAG GGGGLNHQVS TTGGAHRGLL LQASAGGAGG GGAFAPVVVP MSNQYYEVAE LTWEKGNISS HGLLNRPAHN KYPPAAAPSS
101: AQLHAIAGGG GRGGGSPSGD RETLEAVVGE AAARSHFLSQ PAPPWLIGAD AVARAAADAL VPCAARAGES AADGGEAGAS RRKRPRVVGD DSLVVCASQG
201: STAPRRRGES ALLTQLDACG TEADDVCGFR TTTTNNSTSM DRDDKGSPDT ENTSIGGGAS DSRCFSRRSQ RDGLCDDDEE NVVINGDDGA MRSSISTKRS
301: RAAATHNESE RKRRDRINQK MKTLQKLVPN SNKTDKASML DEVIDYLKQL QAQVQLMSRM GSMMMPMAMP QLQMSMMAQM AQMAQMAQMA QMNMGSLGQP
401: GYAGLTPPMM HPPPFVPVSW DTTATATTSL APQAGSGTVP ADAFSAFLAC QAQQNGQQQP GSMEAYNRMV ALYQKMNQTQ QSAPSNPSKQ

Best Arabidopsis Sequence Match ( AT4G00050.1 )
(BLAST)

001: MSQCVPNCHI DDTPAAATTT VRSTTAADIP ILDYEVAELT WENGQLGLHG LGPPRVTASS TKYSTGAGGT LESIVDQATR LPNPKPTDEL VPWFHHRSSR
101: AAMAMDALVP CSNLVHEQQS KPGGVGSTRV GSCSDGRTMG GGKRARVAPE WSGGGSQRLT MDTYDVGFTS TSMGSHDNTI DDHDSVCHSR PQMEDEEEKK
201: AGGKSSVSTK RSRAAAIHNQ SERKRRDKIN QRMKTLQKLV PNSSKTDKAS MLDEVIEYLK QLQAQVSMMS RMNMPSMMLP MAMQQQQQLQ MSLMSNPMGL
301: GMGMGMPGLG LLDLNSMNRA AASAPNIHAN MMPNPFLPMN CPSWDASSND SRFQSPLIPD PMSAFLACST QPTTMEAYSR MATLYQQMQQ QLPPPSNPK

Arabidopsis Description

UNE10Transcription factor UNE10 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZ38]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.