Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES11436 | Sorghum | nucleus | 81.31 | 92.55 |
| Os04t0618600-01 | Rice | nucleus | 70.56 | 83.43 |
| Zm00001d026317_P003 | Maize | nucleus, plastid | 77.57 | 70.04 |
| CDY35224 | Canola | nucleus | 26.17 | 21.62 |
| Solyc04g007430.1.1 | Tomato | nucleus | 16.82 | 19.57 |
| PGSC0003DMT400015377 | Potato | nucleus | 16.36 | 17.24 |
| Zm00001d018416_P001 | Maize | mitochondrion | 24.3 | 15.76 |
| Zm00001d045212_P001 | Maize | nucleus | 24.77 | 15.63 |
| Zm00001d018967_P001 | Maize | nucleus | 20.56 | 15.44 |
| Zm00001d013073_P002 | Maize | nucleus | 19.63 | 14.74 |
| AT4G28815.1 | Thale cress | vacuole | 20.09 | 14.01 |
| Zm00001d020490_P001 | Maize | nucleus | 21.5 | 13.37 |
| Zm00001d031044_P001 | Maize | nucleus | 24.77 | 13.28 |
| CDY06865 | Canola | nucleus | 21.96 | 13.09 |
| Zm00001d034298_P001 | Maize | nucleus | 25.7 | 13.03 |
| CDY35220 | Canola | nucleus | 22.43 | 12.94 |
| AT4G28790.1 | Thale cress | nucleus | 24.3 | 12.59 |
| CDY06870 | Canola | nucleus | 26.64 | 12.53 |
| Zm00001d013130_P001 | Maize | nucleus | 22.43 | 12.4 |
| Zm00001d018374_P001 | Maize | nucleus | 21.96 | 12.08 |
| Zm00001d005750_P002 | Maize | mitochondrion | 22.43 | 11.74 |
| Zm00001d052038_P001 | Maize | nucleus | 18.22 | 11.68 |
| Zm00001d024783_P001 | Maize | nucleus | 26.17 | 11.09 |
| CDY06867 | Canola | nucleus | 24.77 | 11.0 |
| AT4G28800.2 | Thale cress | nucleus | 23.36 | 10.94 |
| Zm00001d033267_P001 | Maize | nucleus | 27.57 | 10.77 |
| Zm00001d040536_P005 | Maize | nucleus | 28.5 | 10.76 |
| Zm00001d045107_P001 | Maize | nucleus | 15.89 | 10.24 |
| Zm00001d000291_P001 | Maize | nucleus | 22.43 | 10.23 |
| AT4G28811.1 | Thale cress | nucleus | 25.7 | 10.11 |
| Zm00001d029898_P001 | Maize | nucleus | 21.96 | 9.59 |
| Zm00001d008205_P001 | Maize | nucleus | 28.5 | 9.56 |
| CDY35222 | Canola | nucleus | 23.83 | 8.84 |
| Zm00001d016873_P001 | Maize | nucleus | 19.63 | 8.59 |
| Bra011061.1-P | Field mustard | nucleus | 20.09 | 8.32 |
| Zm00001d045046_P001 | Maize | nucleus | 18.69 | 8.32 |
| Bra011062.1-P | Field mustard | cytosol | 17.29 | 8.08 |
| Zm00001d037098_P003 | Maize | nucleus | 19.16 | 7.87 |
| Zm00001d029897_P001 | Maize | nucleus | 1.87 | 1.47 |
Protein Annotations
| EntrezGene:100280552 | MapMan:15.5.32 | Gene3D:4.10.280.10 | UniProt:A0A1D6DZ90 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | ProteinID:ONM13842.1 |
| PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR12565 | PANTHER:PTHR12565:SF145 | SMART:SM00353 | SUPFAM:SSF47459 |
| UniParc:UPI000842F9C1 | EnsemblPlantsGene:Zm00001d002288 | EnsemblPlants:Zm00001d002288_P002 | EnsemblPlants:Zm00001d002288_T002 | InterPro:bHLH_dom | SEG:seg |
Description
bHLH-transcription factor 148Protein SPATULA
Coordinates
chr2:-:9618257..9621258
Molecular Weight (calculated)
24747.7 Da
IEP (calculated)
10.103
GRAVY (calculated)
-0.823
Length
214 amino acids
Sequence
(BLAST)
(BLAST)
001: MTRKLIEIRW HKYCAGLKLV SNFVKPQELM EDGSAPRRST PPTRRSRSAE FHNFSERRRR DKINEKLKAL QELLPNCNKT DKVSMLDEAI DYLKSLQLQL
101: QMLVMGKGMS PVVPLELQQY MHYITADPAQ LPPLRPSGQQ HRQFQITQAN PQRQSNVESD FLSQMQNLHS SEPPQNFLRP PKLQLYTPEQ RGGLPNTSHN
201: TGWISGSSSY NFME
101: QMLVMGKGMS PVVPLELQQY MHYITADPAQ LPPLRPSGQQ HRQFQITQAN PQRQSNVESD FLSQMQNLHS SEPPQNFLRP PKLQLYTPEQ RGGLPNTSHN
201: TGWISGSSSY NFME
001: MDPQQQPSSD QNLFIQEDEM TSWLHYPLRD DDFCSDLLFS AAPTATATAT VSQVTAARPP VSSTNESRPP VRNFMNFSRL RGDFNNGRGG ESGPLLSKAV
101: VRESTQVSPS ATPSAAASES GLTRRTDGTD SSAVAGGGAY NRKGKAVAMT APAIEITGTS SSVVSKSEIE PEKTNVDDRK RKEREATTTD ETESRSEETK
201: QARVSTTSTK RSRAAEVHNL SERKRRDRIN ERMKALQELI PRCNKSDKAS MLDEAIEYMK SLQLQIQMMS MGCGMMPMMY PGMQQYMPHM AMGMGMNQPI
301: PPPSFMPFPN MLAAQRPLPT QTHMAGSGPQ YPVHASDPSR VFVPNQQYDP TSGQPQYPAG YTDPYQQFRG LHPTQPPQFQ NQATSYPSSS RVSSSKESED
401: HGNHTTG
101: VRESTQVSPS ATPSAAASES GLTRRTDGTD SSAVAGGGAY NRKGKAVAMT APAIEITGTS SSVVSKSEIE PEKTNVDDRK RKEREATTTD ETESRSEETK
201: QARVSTTSTK RSRAAEVHNL SERKRRDRIN ERMKALQELI PRCNKSDKAS MLDEAIEYMK SLQLQIQMMS MGCGMMPMMY PGMQQYMPHM AMGMGMNQPI
301: PPPSFMPFPN MLAAQRPLPT QTHMAGSGPQ YPVHASDPSR VFVPNQQYDP TSGQPQYPAG YTDPYQQFRG LHPTQPPQFQ NQATSYPSSS RVSSSKESED
401: HGNHTTG
Arabidopsis Description
PIF1Transcription factor PIF1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZM7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.