Factsheet for Zm00001d033267_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU91282	Sorghum	nucleus	81.57	82.78
TraesCS5B01G380200.1	Wheat	nucleus	56.93	69.8
TraesCS5A01G376500.1	Wheat	nucleus	60.4	67.97
TraesCS5D01G386500.1	Wheat	nucleus	60.22	63.95
HORVU5Hr1G093310.11	Barley	nucleus	60.58	60.69
Zm00001d031044_P001	Maize	nucleus	31.02	42.61
GSMUA_Achr6P31370_001	Banana	nucleus	22.26	32.8
GSMUA_Achr6P30080_001	Banana	nucleus	21.72	29.68
GSMUA_Achr5P02280_001	Banana	nucleus	27.37	27.57
Zm00001d002288_P002	Maize	nucleus	10.77	27.57
Zm00001d034298_P001	Maize	nucleus	21.17	27.49
Zm00001d026317_P003	Maize	nucleus, plastid	11.5	26.58
Zm00001d013130_P001	Maize	nucleus	18.07	25.58
GSMUA_Achr4P31770_001	Banana	nucleus	26.46	24.45
Zm00001d018416_P001	Maize	mitochondrion	13.87	23.03
Zm00001d040536_P005	Maize	nucleus	22.99	22.22
Zm00001d045212_P001	Maize	nucleus	13.5	21.83
Zm00001d024783_P001	Maize	nucleus	19.89	21.58
Zm00001d008205_P001	Maize	nucleus	25.0	21.47
Zm00001d013073_P002	Maize	nucleus	9.31	17.89
Zm00001d018374_P001	Maize	nucleus	12.59	17.74
Zm00001d018967_P001	Maize	nucleus	9.12	17.54
Zm00001d029898_P001	Maize	nucleus	15.33	17.14
Zm00001d020490_P001	Maize	nucleus	10.58	16.86
Zm00001d052038_P001	Maize	nucleus	10.04	16.47
Zm00001d045107_P001	Maize	nucleus	8.94	14.76
Zm00001d005750_P002	Maize	mitochondrion	10.77	14.43
Zm00001d000291_P001	Maize	nucleus	12.04	14.07
Zm00001d016873_P001	Maize	nucleus	10.22	11.45
Zm00001d045046_P001	Maize	nucleus	9.85	11.23
Zm00001d037098_P003	Maize	nucleus	10.22	10.75
Zm00001d029897_P001	Maize	nucleus	5.11	10.26

Protein Annotations

MapMan:15.5.32	MapMan:26.1.1.4	Gene3D:4.10.280.10	UniProt:A0A1D6KXA0	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	ProteinID:ONM07085.1
PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR12565	PANTHER:PTHR12565:SF194	SMART:SM00353	SUPFAM:SSF47459
UniParc:UPI0008430A12	EnsemblPlantsGene:Zm00001d033267	EnsemblPlants:Zm00001d033267_P001	EnsemblPlants:Zm00001d033267_T001	InterPro:bHLH_dom	SEG:seg

Description

bHLH-transcription factor 43PIL5

Coordinates

chr1:-:256575051..256579029

Molecular Weight (calculated)

55843.6 Da

IEP (calculated)

6.373

GRAVY (calculated)

-0.336

Length

548 amino acids

Sequence
(BLAST)

001: MNQFVPDWSN MGDTSRPLGE EDDLIELLWC NGHVVMQSQS HRKVPPRPEK AAAVAAPPAP ASVPQEDEGG LWFPFALADS LDKDIFSEFF CEAPTPAPAA
101: ADAAPAASGG GTGTEAGGKS CGGDVPVPAE DDRRGGGGAC AVSAGDPCDL MPPPKSTPAS CSRQQTTMSL ANGGDNAGGD LPGLVRAGAE AGASSMLSAI
201: GSSICGSNQV LVQRAACAPG RASASGSGTA RGDGSGSAAL PSAVGSANAN AVGGGRGHEA SSSGRSNYCC FGAATTTTTT TTTEPASTSN RSSKRKRLDT
301: EDSESPSEDA ESGSAAMLAR KPPQKMTTAR RSRAAEVHNL SERRRRDRIN EKMRALQELI PHCNKTDKAS MLDEAIEYLK SLQLQVQMMW MGSAGIAAPP
401: AVMFPGVHQY LPRMGVGMGA AAAAALPSMP RLPFMAPQPV VPSAPVSVGP VPAYRGHMPA VGITEPYGHY IGVNHLQPAP PPPQVQSGQH YAQGVSYYPP
501: PLGATAKAVQ QAAELHHVPG PGGSIMPAGA APGVLLPESA QGRGPDGG

Best Arabidopsis Sequence Match ( AT2G20180.4 )
(BLAST)

001: MHHFVPDFDT DDDYVNNHNS SLNHLPRKSI TTMGEDDDLM ELLWQNGQVV VQNQRLHTKK PSSSPPKLLP SMDPQQQPSS DQNLFIQEDE MTSWLHYPLR
101: DDDFCSDLLF SAAPTATATA TVSQVTAARP PVSSTNESRP PVRNFMNFSR LRGDFNNGRG GESGPLLSKA VVRESTQVSP SATPSAAASE SGLTRRTDGT
201: DSSAVAGGGA YNRKGKAVAM TAPAIEITGT SSSVVSKSEI EPEKTNVDDR KRKEREATTT DETESRSEET KQARVSTTST KRSRAAEVHN LSERKRRDRI
301: NERMKALQEL IPRCNKSDKA SMLDEAIEYM KSLQLQIQMM SMGCGMMPMM YPGMQQYMPH MAMGMGMNQP IPPPSFMPFP NMLAAQRPLP TQTHMAGSGP
401: QYPVHASDPS RVFVPNQQYD PTSGQPQYPA GYTDPYQQFR GLHPTQPPQF QNQATSYPSS SRVSSSKESE DHGNHTTG

Arabidopsis Description

PIF1Transcription factor PIF1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZM7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.