Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 1
- plasma membrane 1
- mitochondrion 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P11300_001 | Banana | nucleus | 6.91 | 65.08 |
| GSMUA_Achr5P02280_001 | Banana | nucleus | 55.48 | 60.48 |
| GSMUA_Achr6P30080_001 | Banana | nucleus | 37.1 | 54.86 |
| GSMUA_Achr6P31370_001 | Banana | nucleus | 25.46 | 40.59 |
| TraesCS5A01G049600.1 | Wheat | nucleus | 19.22 | 33.93 |
| TraesCS5B01G054800.2 | Wheat | nucleus | 19.06 | 33.33 |
| HORVU5Hr1G011780.1 | Barley | nucleus | 19.06 | 33.14 |
| TraesCS5D01G060300.1 | Wheat | nucleus | 19.39 | 32.86 |
| GSMUA_Achr1P16830_001 | Banana | extracellular | 13.83 | 31.91 |
| Os12t0610200-01 | Rice | nucleus | 23.61 | 31.46 |
| KXG23955 | Sorghum | nucleus | 24.62 | 30.74 |
| Zm00001d031044_P001 | Maize | nucleus | 20.57 | 30.58 |
| TraesCS5B01G380200.1 | Wheat | nucleus | 21.75 | 28.86 |
| TraesCS5A01G376500.1 | Wheat | nucleus | 22.26 | 27.1 |
| OQU91282 | Sorghum | nucleus | 24.45 | 26.85 |
| Zm00001d033267_P001 | Maize | nucleus | 24.45 | 26.46 |
| TraesCS5D01G386500.1 | Wheat | nucleus | 22.6 | 25.97 |
| HORVU5Hr1G093310.11 | Barley | nucleus | 22.93 | 24.86 |
| GSMUA_Achr10P... | Banana | plastid | 13.66 | 23.62 |
| GSMUA_Achr5P18390_001 | Banana | nucleus | 22.6 | 22.11 |
| GSMUA_Achr8P15670_001 | Banana | nucleus | 12.65 | 21.25 |
| GSMUA_Achr1P19000_001 | Banana | mitochondrion, nucleus | 19.73 | 19.73 |
| GSMUA_Achr5P03100_001 | Banana | nucleus | 8.77 | 18.98 |
| GSMUA_Achr4P21070_001 | Banana | nucleus | 8.94 | 17.67 |
| GSMUA_Achr4P01910_001 | Banana | nucleus | 12.98 | 17.15 |
| GSMUA_Achr10P... | Banana | nucleus | 11.97 | 16.14 |
| GSMUA_Achr7P20810_001 | Banana | nucleus | 15.85 | 15.69 |
| GSMUA_Achr9P25560_001 | Banana | nucleus | 9.11 | 15.3 |
| GSMUA_Achr10P... | Banana | nucleus | 10.29 | 15.25 |
| GSMUA_Achr3P04630_001 | Banana | nucleus | 12.48 | 15.16 |
| GSMUA_Achr5P16470_001 | Banana | nucleus | 11.13 | 14.51 |
| GSMUA_Achr9P18080_001 | Banana | nucleus | 9.61 | 11.75 |
| GSMUA_Achr3P10120_001 | Banana | nucleus | 9.44 | 10.28 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr4P31770_001 | EnsemblPlants:GSMUA_Achr4T31770_001 | EnsemblPlantsGene:GSMUA_Achr4G31770_001 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom |
| PANTHER:PTHR12565 | PANTHER:PTHR12565:SF194 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg | SMART:SM00353 |
| SUPFAM:SSF47459 | UniParc:UPI000296E97D | UniProt:M0STT9 | MapMan:15.5.32 | MapMan:26.1.1.4 | : |
Description
Putative Transcription factor PIF5 [Source:GMGC_GENE;Acc:GSMUA_Achr4G31770_001]
Coordinates
chr4:-:28836180..28840134
Molecular Weight (calculated)
65126.0 Da
IEP (calculated)
6.342
GRAVY (calculated)
-0.456
Length
593 amino acids
Sequence
(BLAST)
(BLAST)
001: MSCGLLFVNF RIWPWLKEQR VKCLVGELRG ALSEAAIHQA MNHYVPDWAM DDDSGCLTDL LPMTNQKKPM GPDNELIELL WRNGHVVMHS QSHRRPPANV
101: DELKQAQKPD QVQKHEQQPL GGSGNLMQDA DTGSWFQYPL DDSFEKEFCS EFFPEITGGA DAAADSDKIS KDLGGGSSST KAGAQESSMM TVGSSTCGSN
201: QIHAHTDPSN NLSHDAADIV TGLEEDTRMR VLSEGMQSKA NECTLTSTSG GSGSSYGRTG QQNASDRSHK RKARDDVDDS GCQSEEVEYE SIEEKKPAQR
301: PISKRRSRAA EVHNLSERRR RDRINEKMKA LQDLIPHCNK TDKASMLDEA IEYLKSLQLQ VQMMWMGSGM ASMMFPGVQQ YISSMGMGMG MGMGHASVPA
401: IHGAVQLPRV PFVNQSVATA SGTNQTSFFP SPAMNAVNFP NQMQNIHLPE SYARYLGMPI MPSHQATNFC TYGSQPVQQN QSAGAPGGSL RPGAGGPNCA
501: STENNRSDIS IVLCISINIL PLLHSQLHST IAFFHLVSFG WISSNIFQRF LTLKLVNNSR IQGLTGDHLI CYLYLEQDWF LSAKIESGLS PVV
101: DELKQAQKPD QVQKHEQQPL GGSGNLMQDA DTGSWFQYPL DDSFEKEFCS EFFPEITGGA DAAADSDKIS KDLGGGSSST KAGAQESSMM TVGSSTCGSN
201: QIHAHTDPSN NLSHDAADIV TGLEEDTRMR VLSEGMQSKA NECTLTSTSG GSGSSYGRTG QQNASDRSHK RKARDDVDDS GCQSEEVEYE SIEEKKPAQR
301: PISKRRSRAA EVHNLSERRR RDRINEKMKA LQDLIPHCNK TDKASMLDEA IEYLKSLQLQ VQMMWMGSGM ASMMFPGVQQ YISSMGMGMG MGMGHASVPA
401: IHGAVQLPRV PFVNQSVATA SGTNQTSFFP SPAMNAVNFP NQMQNIHLPE SYARYLGMPI MPSHQATNFC TYGSQPVQQN QSAGAPGGSL RPGAGGPNCA
501: STENNRSDIS IVLCISINIL PLLHSQLHST IAFFHLVSFG WISSNIFQRF LTLKLVNNSR IQGLTGDHLI CYLYLEQDWF LSAKIESGLS PVV
001: MEQVFADWNF EDNFHMSTNK RSIRPEDELV ELLWRDGQVV LQSQARREPS VQVQTHKQET LRKPNNIFLD NQETVQKPNY AALDDQETVS WIQYPPDDVI
101: DPFESEFSSH FFSSIDHLGG PEKPRTIEET VKHEAQAMAP PKFRSSVITV GPSHCGSNQS TNIHQATTLP VSMSDRSKNV EERLDTSSGG SSGCSYGRNN
201: KETVSGTSVT IDRKRKHVMD ADQESVSQSD IGLTSTDDQT MGNKSSQRSG STRRSRAAEV HNLSERRRRD RINERMKALQ ELIPHCSRTD KASILDEAID
301: YLKSLQMQLQ VMWMGSGMAA AAAAAASPMM FPGVQSSPYI NQMAMQSQMQ LSQFPVMNRS APQNHPGLVC QNPVQLQLQA QNQILSEQLA RYMGGIPQMP
401: PAGNQTVQQQ PADMLGFGSP AGPQSQLSAP ATTDSLHMGK IG
101: DPFESEFSSH FFSSIDHLGG PEKPRTIEET VKHEAQAMAP PKFRSSVITV GPSHCGSNQS TNIHQATTLP VSMSDRSKNV EERLDTSSGG SSGCSYGRNN
201: KETVSGTSVT IDRKRKHVMD ADQESVSQSD IGLTSTDDQT MGNKSSQRSG STRRSRAAEV HNLSERRRRD RINERMKALQ ELIPHCSRTD KASILDEAID
301: YLKSLQMQLQ VMWMGSGMAA AAAAAASPMM FPGVQSSPYI NQMAMQSQMQ LSQFPVMNRS APQNHPGLVC QNPVQLQLQA QNQILSEQLA RYMGGIPQMP
401: PAGNQTVQQQ PADMLGFGSP AGPQSQLSAP ATTDSLHMGK IG
Arabidopsis Description
PIF5Transcription factor PIF5 [Source:UniProtKB/Swiss-Prot;Acc:Q84LH8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.