Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG23955 | Sorghum | nucleus | 60.0 | 56.21 |
| TraesCS5A01G049600.1 | Wheat | nucleus | 42.25 | 55.95 |
| TraesCS5B01G054800.2 | Wheat | nucleus | 40.9 | 53.69 |
| Zm00001d031044_P001 | Maize | nucleus | 46.74 | 52.13 |
| TraesCS5D01G060300.1 | Wheat | nucleus | 40.67 | 51.71 |
| HORVU5Hr1G011780.1 | Barley | nucleus | 39.33 | 51.32 |
| Os03t0639300-01 | Rice | nucleus | 26.29 | 38.11 |
| Os04t0618600-01 | Rice | nucleus | 13.71 | 33.7 |
| GSMUA_Achr6P31370_001 | Banana | nucleus | 27.19 | 32.53 |
| GSMUA_Achr6P30080_001 | Banana | nucleus | 27.42 | 30.42 |
| Os06t0164400-01 | Rice | cytosol, mitochondrion, nucleus | 13.26 | 29.95 |
| Os03t0782500-01 | Rice | nucleus | 25.84 | 28.05 |
| GSMUA_Achr5P02280_001 | Banana | nucleus | 31.24 | 25.55 |
| Os07t0143200-01 | Rice | nucleus | 23.6 | 25.36 |
| Os02t0805250-00 | Rice | nucleus | 15.96 | 25.36 |
| GSMUA_Achr4P31770_001 | Banana | nucleus | 31.46 | 23.61 |
| Os07t0182200-01 | Rice | cytosol | 7.19 | 23.53 |
| Os05t0139100-01 | Rice | nucleus | 24.04 | 21.19 |
| Os10t0556200-01 | Rice | nucleus | 20.22 | 19.35 |
| Os06t0184000-00 | Rice | nucleus | 15.51 | 17.34 |
| Os01t0286100-01 | Rice | nucleus | 24.72 | 17.27 |
| Os03t0797600-01 | Rice | nucleus | 11.24 | 17.01 |
| Os02t0795800-00 | Rice | endoplasmic reticulum, mitochondrion, nucleus, plastid | 9.21 | 14.64 |
| Os06t0193400-01 | Rice | nucleus | 12.58 | 11.72 |
| Os02t0564700-01 | Rice | nucleus | 11.91 | 10.11 |
Protein Annotations
| MapMan:15.5.32 | MapMan:26.1.1.4 | Gene3D:4.10.280.10 | EntrezGene:4352761 | ProteinID:ABA99363.1 | ProteinID:ABA99364.2 |
| EMBL:AK066763 | ProteinID:BAF30265.1 | ProteinID:BAT18028.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 |
| InterPro:IPR036638 | EnsemblPlantsGene:Os12g0610200 | EnsemblPlants:Os12t0610200-01 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR12565 |
| PANTHER:PTHR12565:SF194 | UniProt:Q0IM00 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0000680C59 | RefSeq:XP_015618078.1 |
| RefSeq:XP_015618079.1 | InterPro:bHLH_dom | SEG:seg | : | : | : |
Description
PIL11Similar to Phytochrome-interacting factor 3 (Phytochrome-associated protein 3) (Basic helix-loop-helix protein 8) (bHLH8) (AtbHLH008). (Os12t0610200-01)
Coordinates
chr12:+:25768808..25773052
Molecular Weight (calculated)
47023.0 Da
IEP (calculated)
6.600
GRAVY (calculated)
-0.391
Length
445 amino acids
Sequence
(BLAST)
(BLAST)
001: MNQFVPDWNT TSMGDGFAPL GEDDGLVELL WCNGHVVMQS QAPRKPPRPE KTTAAAAAAM AEDESASWFQ YPVDDVLEKD LFTELFGEMT AAGGGGGDVR
101: RAACKEERGA VAAFQSRMMP PPWPARGKAE FGDVDDVCGV SEVVMAKMDG AAAAETVGES SMLTIGSSIC GSNHVQTPPV GNGKAGAGTA GAARRAHDTA
201: TVASSSMRSR SCTAKAEPRD VAAAGVGGKR KQRGGAAMES GSPSEDVEFE SAAATCSPAQ KTTTAKRRRA AEVHNLSERR RRDRINEKMK ALQELIPHCN
301: KTDKASMLDE AIEYLKSLQL QLQMMWMGGG MAPPAVMFPA AGVHQYMQRM GAVGMGPPHM ASLPRMPPFM APPPAAVQSS PVVSMADPYA RCLAVDHLQP
401: PPPMHYLQGM SFYQLAAAKN LQQQQNTAEA PPPPPAGGNR AAADS
101: RAACKEERGA VAAFQSRMMP PPWPARGKAE FGDVDDVCGV SEVVMAKMDG AAAAETVGES SMLTIGSSIC GSNHVQTPPV GNGKAGAGTA GAARRAHDTA
201: TVASSSMRSR SCTAKAEPRD VAAAGVGGKR KQRGGAAMES GSPSEDVEFE SAAATCSPAQ KTTTAKRRRA AEVHNLSERR RRDRINEKMK ALQELIPHCN
301: KTDKASMLDE AIEYLKSLQL QLQMMWMGGG MAPPAVMFPA AGVHQYMQRM GAVGMGPPHM ASLPRMPPFM APPPAAVQSS PVVSMADPYA RCLAVDHLQP
401: PPPMHYLQGM SFYQLAAAKN LQQQQNTAEA PPPPPAGGNR AAADS
001: MEQVFADWNF EDNFHMSTNK RSIRPEDELV ELLWRDGQVV LQSQARREPS VQVQTHKQET LRKPNNIFLD NQETVQKPNY AALDDQETVS WIQYPPDDVI
101: DPFESEFSSH FFSSIDHLGG PEKPRTIEET VKHEAQAMAP PKFRSSVITV GPSHCGSNQS TNIHQATTLP VSMSDRSKNV EERLDTSSGG SSGCSYGRNN
201: KETVSGTSVT IDRKRKHVMD ADQESVSQSD IGLTSTDDQT MGNKSSQRSG STRRSRAAEV HNLSERRRRD RINERMKALQ ELIPHCSRTD KASILDEAID
301: YLKSLQMQLQ VMWMGSGMAA AAAAAASPMM FPGVQSSPYI NQMAMQSQMQ LSQFPVMNRS APQNHPGLVC QNPVQLQLQA QNQILSEQLA RYMGGIPQMP
401: PAGNQTVQQQ PADMLGFGSP AGPQSQLSAP ATTDSLHMGK IG
101: DPFESEFSSH FFSSIDHLGG PEKPRTIEET VKHEAQAMAP PKFRSSVITV GPSHCGSNQS TNIHQATTLP VSMSDRSKNV EERLDTSSGG SSGCSYGRNN
201: KETVSGTSVT IDRKRKHVMD ADQESVSQSD IGLTSTDDQT MGNKSSQRSG STRRSRAAEV HNLSERRRRD RINERMKALQ ELIPHCSRTD KASILDEAID
301: YLKSLQMQLQ VMWMGSGMAA AAAAAASPMM FPGVQSSPYI NQMAMQSQMQ LSQFPVMNRS APQNHPGLVC QNPVQLQLQA QNQILSEQLA RYMGGIPQMP
401: PAGNQTVQQQ PADMLGFGSP AGPQSQLSAP ATTDSLHMGK IG
Arabidopsis Description
PIF5Transcription factor PIF5 [Source:UniProtKB/Swiss-Prot;Acc:Q84LH8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.