Factsheet for GSMUA_Achr10P30710_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH72281	Soybean	nucleus, plastid	16.82	59.2
GSMUA_Achr4P01910_001	Banana	nucleus	56.59	55.46
GSMUA_Achr3P04630_001	Banana	nucleus	57.73	52.05
GSMUA_Achr5P16470_001	Banana	nucleus	53.18	51.43
GSMUA_Achr9P11300_001	Banana	nucleus	7.27	50.79
GSMUA_Achr10P...	Banana	nucleus	45.45	50.0
CDY46132	Canola	endoplasmic reticulum	18.86	47.16
GSMUA_Achr5P03100_001	Banana	nucleus	28.64	45.99
CDY20290	Canola	endoplasmic reticulum, extracellular	21.14	45.81
GSMUA_Achr4P21070_001	Banana	nucleus	29.77	43.67
CDY46133	Canola	nucleus	16.59	38.22
GSMUA_Achr9P25560_001	Banana	nucleus	30.45	37.96
GSMUA_Achr9P18080_001	Banana	nucleus	27.73	25.15
GSMUA_Achr3P10120_001	Banana	nucleus	29.32	23.67
GSMUA_Achr6P31370_001	Banana	nucleus	16.14	19.09
GSMUA_Achr1P16830_001	Banana	extracellular	11.14	19.07
GSMUA_Achr8P15670_001	Banana	nucleus	12.95	16.15
GSMUA_Achr6P30080_001	Banana	nucleus	14.55	15.96
GSMUA_Achr10P...	Banana	plastid	12.27	15.74
GSMUA_Achr5P02280_001	Banana	nucleus	15.45	12.5
GSMUA_Achr5P18390_001	Banana	nucleus	16.59	12.05
GSMUA_Achr4P31770_001	Banana	nucleus	16.14	11.97
GSMUA_Achr1P19000_001	Banana	mitochondrion, nucleus	15.23	11.3
GSMUA_Achr7P20810_001	Banana	nucleus	13.64	10.02

Protein Annotations

EnsemblPlants:GSMUA_Achr10P30710_001	EnsemblPlants:GSMUA_Achr10T30710_001	EnsemblPlantsGene:GSMUA_Achr10G30710_001	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom
PANTHER:PTHR16223	PANTHER:PTHR16223:SF28	PFAM:PF00010	PFscan:PS50888	SEG:seg	SMART:SM00353
SUPFAM:SSF47459	UniParc:UPI0002951CE5	UniProt:M0RMU5	MapMan:15.5.32	:	:

Description

Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G30710_001]

Coordinates

chr10:-:32986907..32989147

Molecular Weight (calculated)

45225.1 Da

IEP (calculated)

6.515

GRAVY (calculated)

-0.380

Length

440 amino acids

Sequence
(BLAST)

001: MQHGSREVRG GMAASASAQM ALHDDHGSQQ IQNPGLHDDF FDQMLSGLPS AWPDLGNPKS PWDASAAQKL FRIDLAGKQP DESQPEAAAE GLRYASYEEA
101: TMLASRLSQS QGSGGSSPTG EAMMLQLNNH HILPAVGRSQ TAVGGSVGES GLLPLPLTLG SGGAADPRII VETPRDEMDR PYKSPDHNGG EELYNGLGGS
201: IRAAQAATGQ HFHHPQSYGG AAAPAGVGQG PAASASSGGG TPPQKQKVRA RRGQATDPHS IAERLRRERI AERMKALQEL VPNANKTDKA SMLDEIIDYV
301: KFLQLQVKVL SMSRLGGAAA VAPLVADIST EGPGGRAGAN GAAAGNNDSL TVTEHRVAKM MEEDMGSAMQ YLQGKGLCLM PISLASAISS AACRPSAGGL
401: VPAPPPATTS AAAAAESPSS PSASALTVQS AAADTTAPKR

Best Arabidopsis Sequence Match ( AT2G24260.2 )
(BLAST)

001: MNQQGQTQTQ TQPQASASTA TGGTVAAPPQ SRTKIRARRG QATDPHSIAE RLRRERIAER MKALQELVPN GNKTDKASML DEIIDYVKFL QLQVKVLSMS
101: RLGGAASVSS QISEAGGSHG NASSAMVGGS QTAGNSNDSV TMTEHQVAKL MEEDMGSAMQ YLQGKGLCLM PISLATAIST ATCHSRNPLI PGAVADVGGP
201: SPPNLSGMTI QSTSTKMGSG NGKLNGNGVT ERSSSIAVKE AVSVSKA

Arabidopsis Description

BHLH66Transcription factor bHLH66 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUG9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.