Factsheet for Zm00001d005750_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d000291_P001	Maize	nucleus	97.07	84.65
Zm00001d020490_P001	Maize	nucleus	55.5	65.99
Zm00001d018374_P001	Maize	nucleus	43.03	45.24
Zm00001d018967_P001	Maize	nucleus	31.3	44.91
Zm00001d052038_P001	Maize	nucleus	36.43	44.61
Zm00001d013073_P002	Maize	nucleus	30.56	43.86
Zm00001d045107_P001	Maize	nucleus	34.96	43.07
Zm00001d016873_P001	Maize	nucleus	30.32	25.36
Zm00001d045046_P001	Maize	nucleus	29.34	24.95
Zm00001d037098_P003	Maize	nucleus	29.34	23.03
Zm00001d002288_P002	Maize	nucleus	11.74	22.43
Zm00001d026317_P003	Maize	nucleus, plastid	12.22	21.1
Zm00001d018416_P001	Maize	mitochondrion	13.45	16.67
Zm00001d045212_P001	Maize	nucleus	12.47	15.04
Zm00001d034298_P001	Maize	nucleus	14.43	13.98
Zm00001d013130_P001	Maize	nucleus	12.71	13.44
Zm00001d031044_P001	Maize	nucleus	12.96	13.28
Zm00001d024783_P001	Maize	nucleus	16.14	13.07
Zm00001d040536_P005	Maize	nucleus	16.38	11.82
Zm00001d029898_P001	Maize	nucleus	13.69	11.43
Zm00001d008205_P001	Maize	nucleus	17.6	11.29
Zm00001d033267_P001	Maize	nucleus	14.43	10.77
Zm00001d029897_P001	Maize	nucleus	1.96	2.93

Protein Annotations

EnsemblPlants:Zm00001d005750_P002	EnsemblPlants:Zm00001d005750_T002	EnsemblPlantsGene:Zm00001d005750	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom
PANTHER:PTHR16223	PANTHER:PTHR16223:SF28	PFAM:PF00010	PFscan:PS50888	ProteinID:ONM21798.1	SEG:seg
SMART:SM00353	SUPFAM:SSF47459	UniParc:UPI000843A543	UniProt:A0A1D6EPV1	MapMan:15.5.32	:

Description

Transcription factor bHLH69

Coordinates

chr2:+:186080354..186083496

Molecular Weight (calculated)

41599.4 Da

IEP (calculated)

9.302

GRAVY (calculated)

-0.270

Length

409 amino acids

Sequence
(BLAST)

001: MAARRRSRCS TSRSTWVGWG LYDDSALLAS RLRQHQISGG GGGEAVKQMV LQQLADLRQE HHVLLQGMGR STSTGGSRDG GLLLPLSLGS GGSGGDVQAL
101: LKAVADSAGG EAAGVFGGSF AGSLHHHQQQ QQHFQSHPQQ QTAPLPGQGF GGGAGASGGV SQPQAGAACG GAAAPPRQRV RARRGQATDP HSIAERLRRE
201: RIAERMKALQ ELVPNANKTD KASMLDEIVD YVKFLQLQVL SMSRLGGAAA VAPLVADMSS EGRGGVAVAA GSDDGLAVTE QQVAKLMEED MGTAMQYLQG
301: KGLCLMPVSL ASAISSATCH MRPPVGGPGL GVAAAAAHHM AAMRLPPHAM NGGAGAGADA VPASPSMSVL TAQSAMAPNG AGGGTDGEGS HSQQQQRHHP
401: KDAASVSKP

Best Arabidopsis Sequence Match ( AT2G24260.2 )
(BLAST)

001: MNQQGQTQTQ TQPQASASTA TGGTVAAPPQ SRTKIRARRG QATDPHSIAE RLRRERIAER MKALQELVPN GNKTDKASML DEIIDYVKFL QLQVKVLSMS
101: RLGGAASVSS QISEAGGSHG NASSAMVGGS QTAGNSNDSV TMTEHQVAKL MEEDMGSAMQ YLQGKGLCLM PISLATAIST ATCHSRNPLI PGAVADVGGP
201: SPPNLSGMTI QSTSTKMGSG NGKLNGNGVT ERSSSIAVKE AVSVSKA

Arabidopsis Description

BHLH66Transcription factor bHLH66 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUG9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.