Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH72281 | Soybean | nucleus, plastid | 21.51 | 59.2 |
| Zm00001d000291_P001 | Maize | nucleus | 76.74 | 56.29 |
| Zm00001d005750_P002 | Maize | mitochondrion | 65.99 | 55.5 |
| TraesCS5A01G225700.1 | Wheat | nucleus | 68.31 | 51.31 |
| TraesCS5B01G224200.1 | Wheat | nucleus | 69.19 | 51.18 |
| TraesCS5D01G233000.1 | Wheat | nucleus | 69.19 | 50.85 |
| CDY20290 | Canola | endoplasmic reticulum, extracellular | 27.03 | 45.81 |
| CDY46132 | Canola | endoplasmic reticulum | 22.67 | 44.32 |
| Zm00001d018967_P001 | Maize | nucleus | 35.17 | 42.46 |
| Zm00001d013073_P002 | Maize | nucleus | 34.3 | 41.4 |
| Zm00001d018374_P001 | Maize | nucleus | 43.9 | 38.82 |
| GSMUA_Achr5P16470_001 | Banana | nucleus | 50.58 | 38.24 |
| Zm00001d052038_P001 | Maize | nucleus | 36.63 | 37.72 |
| Os06t0184000-00 | Rice | nucleus | 42.15 | 36.43 |
| CDY46133 | Canola | nucleus | 19.77 | 35.6 |
| EER89334 | Sorghum | nucleus | 46.22 | 35.57 |
| Zm00001d045107_P001 | Maize | nucleus | 33.72 | 34.94 |
| Zm00001d016873_P001 | Maize | nucleus | 34.59 | 24.34 |
| Zm00001d045046_P001 | Maize | nucleus | 31.1 | 22.25 |
| Zm00001d002288_P002 | Maize | nucleus | 13.37 | 21.5 |
| Zm00001d037098_P003 | Maize | nucleus | 31.1 | 20.54 |
| Zm00001d026317_P003 | Maize | nucleus, plastid | 13.37 | 19.41 |
| Zm00001d018416_P001 | Maize | mitochondrion | 15.12 | 15.76 |
| Zm00001d034298_P001 | Maize | nucleus | 17.73 | 14.46 |
| Zm00001d045212_P001 | Maize | nucleus | 13.95 | 14.16 |
| Zm00001d013130_P001 | Maize | nucleus | 15.7 | 13.95 |
| Zm00001d031044_P001 | Maize | nucleus | 15.7 | 13.53 |
| Zm00001d029898_P001 | Maize | nucleus | 18.31 | 12.86 |
| Zm00001d024783_P001 | Maize | nucleus | 16.86 | 11.49 |
| Zm00001d040536_P005 | Maize | nucleus | 18.6 | 11.29 |
| Zm00001d008205_P001 | Maize | nucleus | 20.06 | 10.81 |
| Zm00001d033267_P001 | Maize | nucleus | 16.86 | 10.58 |
| Zm00001d029897_P001 | Maize | nucleus | 3.78 | 4.76 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | UniProt:A0A1D6I4D4 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | ProteinID:ONM55001.1 |
| PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR16223 | PANTHER:PTHR16223:SF28 | SMART:SM00353 | SUPFAM:SSF47459 |
| UniParc:UPI000220A4B0 | EnsemblPlantsGene:Zm00001d020490 | EnsemblPlants:Zm00001d020490_P001 | EnsemblPlants:Zm00001d020490_T001 | InterPro:bHLH_dom | SEG:seg |
Description
bHLH-transcription factor 87Transcription factor bHLH69
Coordinates
chr7:-:118687248..118689664
Molecular Weight (calculated)
34859.4 Da
IEP (calculated)
7.819
GRAVY (calculated)
-0.278
Length
344 amino acids
Sequence
(BLAST)
(BLAST)
001: MVAASQISLD DLRAAAGAAG GVHDDFLDQM FGGLPPSAWP ELASVAGGKA PDGGAQAEGM EHQPQHFGRG EIAGSVFGGS FVGSLQQQQH FQSHHPQQQT
101: APPLPGQGFG GGGRGGGRAG APGGMSQPQA GAAVGGAAAP PRQRVRARRG QATDPHSIAE RLRRERIAER MKALQELVSN ANKTDKASML DEIIDYVKFL
201: QLQVLSMSRL GGAARSRQGR DGAAAAAGSD GLAVTEQQVA KLMEEDMGTA MQYLQGKGLC LMPVSLAAAI SSATCHMRPP VGGPGVAAGH HMAAMRLPHV
301: TNGGAGADDV SASPSMSMLT TPSAMPNGAG AGVDGKDAAS VSKP
101: APPLPGQGFG GGGRGGGRAG APGGMSQPQA GAAVGGAAAP PRQRVRARRG QATDPHSIAE RLRRERIAER MKALQELVSN ANKTDKASML DEIIDYVKFL
201: QLQVLSMSRL GGAARSRQGR DGAAAAAGSD GLAVTEQQVA KLMEEDMGTA MQYLQGKGLC LMPVSLAAAI SSATCHMRPP VGGPGVAAGH HMAAMRLPHV
301: TNGGAGADDV SASPSMSMLT TPSAMPNGAG AGVDGKDAAS VSKP
001: MMNSSLLTPS SSSSSHIQTP STTFDHEDFL DQIFSSAPWP SVVDDAHPLP SDGFHGHDVD SRNQPIMMMP LNDGSSVHAL YNGFSVAGSL PNFQIPQGSG
101: GGLMNQQGQT QTQTQPQASA STATGGTVAA PPQSRTKIRA RRGQATDPHS IAERLRRERI AERMKALQEL VPNGNKTDKA SMLDEIIDYV KFLQLQVKVL
201: SMSRLGGAAS VSSQISEAGG SHGNASSAMV GGSQTAGNSN DSVTMTEHQV AKLMEEDMGS AMQYLQGKGL CLMPISLATA ISTATCHSRN PLIPGAVADV
301: GGPSPPNLSG MTIQSTSTKM GSGNGKLNGN GVTERSSSIA VKEAVSVSKA
101: GGLMNQQGQT QTQTQPQASA STATGGTVAA PPQSRTKIRA RRGQATDPHS IAERLRRERI AERMKALQEL VPNGNKTDKA SMLDEIIDYV KFLQLQVKVL
201: SMSRLGGAAS VSSQISEAGG SHGNASSAMV GGSQTAGNSN DSVTMTEHQV AKLMEEDMGS AMQYLQGKGL CLMPISLATA ISTATCHSRN PLIPGAVADV
301: GGPSPPNLSG MTIQSTSTKM GSGNGKLNGN GVTERSSSIA VKEAVSVSKA
Arabidopsis Description
BHLH66Transcription factor bHLH66 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUG9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.