CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os06t0184000-00	Rice	nucleus	66.44	74.62
TraesCS7D01G149400.1	Wheat	nucleus	65.77	73.5
TraesCS7A01G147500.1	Wheat	nucleus	64.88	72.86
EES05953	Sorghum	nucleus	61.07	69.47
KRH72281	Soybean	nucleus, plastid	16.55	59.2
Zm00001d020490_P001	Maize	nucleus	35.57	46.22
CDY20290	Canola	endoplasmic reticulum, extracellular	20.81	45.81
KXG37359	Sorghum	nucleus	29.08	45.77
OQU89497	Sorghum	nucleus	47.43	45.59
OQU88567	Sorghum	nucleus	27.96	45.13
TraesCS5B01G224200.1	Wheat	nucleus	46.76	44.95
CDY46132	Canola	endoplasmic reticulum	17.45	44.32
GSMUA_Achr5P16470_001	Banana	nucleus	44.3	43.52
CDY46133	Canola	nucleus	14.32	33.51
KXG19523	Sorghum	nucleus	27.29	24.8
EES11436	Sorghum	nucleus	10.29	24.47
KXG30460	Sorghum	nucleus	27.29	24.11
OQU75890	Sorghum	nucleus	11.41	17.53
KXG31309	Sorghum	nucleus	11.41	17.47
KXG23955	Sorghum	nucleus	15.88	14.95
OQU88421	Sorghum	nucleus	13.2	14.29
OQU92150	Sorghum	nucleus	16.11	13.41
OQU91282	Sorghum	nucleus	15.66	12.96
KXG37432	Sorghum	plastid	12.3	11.41
KXG21255	Sorghum	nucleus	17.0	11.05
KXG32305	Sorghum	nucleus	14.77	10.93

Protein Annotations

MapMan:15.5.32	Gene3D:4.10.280.10	EntrezGene:8065414	UniProt:C5Z5I4	EnsemblPlants:EER89334	ProteinID:EER89334
ProteinID:EER89334.1	GO:GO:0001046	GO:GO:0001228	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006366	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0045944	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638
PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR16223	PANTHER:PTHR16223:SF28	SMART:SM00353	EnsemblPlantsGene:SORBI_3010G065500
SUPFAM:SSF47459	UniParc:UPI0001A8972E	RefSeq:XP_002437967.1	InterPro:bHLH_dom	SEG:seg	:

Description

hypothetical protein

Coordinates

chr10:-:5198401..5201838

Molecular Weight (calculated)

44368.4 Da

IEP (calculated)

6.870

GRAVY (calculated)

-0.493

Length

447 amino acids

Sequence
(BLAST)

001: MQPSGREMAG GEGGGGPQQQ ADDFFDQMLS TLPSAWADLG AGGKSPWELT PGTGAGAAAE DPAAQQSHFG DESALLASRL RQHQIGGGDV KSSASPVMLQ
101: LSDLHRHGGL GGEESRGNGF SPLPLFSDRS SVPAREEMEG GFKSPNSAGG DHSLFNGFGM HGAAAGQPQF GQSGSMSPQS MGGPAASGGA PQAGGAASSA
201: GGGGAAPPRQ QRQRARRGQA TDPHSIAERL RRERIAERMK SLQELVPNAN KTDKASMLDE IIDYVKFLQL QVKVLSMSRL GGAAGMAPLV ASMASSEGNS
301: NGSGGGNNNS GGKGSGGAAS ATTTTKSGSG ENGNGNGSGG VRVTEHQVAK MMEEDMGTAM QYLQGKGLCL MPISLASAIS SATSSASLLS RPPAVGRHAT
401: AVAGQMHDAN GGAAAAATAS PASAANSAGG GGGGDDSRSA RDGGGKQ

Best Arabidopsis Sequence Match ( AT2G24260.1 )
(BLAST)

001: MMNSSLLTPS SSSSSHIQTP STTFDHEDFL DQIFSSAPWP SVVDDAHPLP SDGFHGHDVD SRNQPIMMMP LNDGSSVHAL YNGFSVAGSL PNFQIPQGSG
101: GGLMNQQGQT QTQTQPQASA STATGGTVAA PPQSRTKIRA RRGQATDPHS IAERLRRERI AERMKALQEL VPNGNKTDKA SMLDEIIDYV KFLQLQVKVL
201: SMSRLGGAAS VSSQISEAGG SHGNASSAMV GGSQTAGNSN DSVTMTEHQV AKLMEEDMGS AMQYLQGKGL CLMPISLATA ISTATCHSRN PLIPGAVADV
301: GGPSPPNLSG MTIQSTSTKM GSGNGKLNGN GVTERSSSIA VKEAVSVSKA

Arabidopsis Description

BHLH66Transcription factor bHLH66 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUG9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.