CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018374_P001	Maize	nucleus	89.31	90.23
EER89334	Sorghum	nucleus	69.47	61.07
CDY46132	Canola	endoplasmic reticulum	20.87	46.59
CDY20290	Canola	endoplasmic reticulum, extracellular	23.92	46.31
OQU89497	Sorghum	nucleus	53.94	45.59
OQU88567	Sorghum	nucleus	31.3	44.4
KXG37359	Sorghum	nucleus	31.81	44.01
CDY46133	Canola	nucleus	17.56	36.13
KXG19523	Sorghum	nucleus	31.3	25.0
KXG30460	Sorghum	nucleus	31.55	24.51
EES11436	Sorghum	nucleus	11.2	23.4
OQU75890	Sorghum	nucleus	13.74	18.56
KXG31309	Sorghum	nucleus	13.74	18.49
KXG23955	Sorghum	nucleus	18.83	15.58
OQU88421	Sorghum	nucleus	15.27	14.53
OQU91282	Sorghum	nucleus	18.07	13.15
OQU92150	Sorghum	nucleus	17.3	12.66
KXG32305	Sorghum	nucleus	17.3	11.26
KXG21255	Sorghum	nucleus	19.08	10.9
KXG37432	Sorghum	plastid	13.23	10.79

Protein Annotations

MapMan:15.5.32	Gene3D:4.10.280.10	EntrezGene:8081987	UniProt:C5XUG1	EnsemblPlants:EES05953	ProteinID:EES05953
ProteinID:EES05953.1	GO:GO:0001046	GO:GO:0001228	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006366	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0045944	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638
PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR16223	PANTHER:PTHR16223:SF28	SMART:SM00353	EnsemblPlantsGene:SORBI_3004G329800
SUPFAM:SSF47459	UniParc:UPI0001A85B74	RefSeq:XP_002452977.1	InterPro:bHLH_dom	SEG:seg	:

Description

hypothetical protein

Coordinates

chr4:+:66367141..66371635

Molecular Weight (calculated)

39538.4 Da

IEP (calculated)

5.611

GRAVY (calculated)

-0.348

Length

393 amino acids

Sequence
(BLAST)

001: MQPSGREMQG GGGQDDFFDQ MLSTLPAAWS DLGSGKSPWE LPAGAGAVPE DAAAYDEAAL LASRLRHHQI GGGGAGAGEK PLMLHLSDLH GLGGGGAGDD
101: AGFMPLPLFT DRARDDMDAA FKSPNATGAD QALYNGFGAA GMHAAVHQPP FGQGGSMPAA QSFGGGAAAA GGAPAPAAGA ASAGGGAAPP RQQRQRAKRG
201: QATDPHSIAE RLRRERIAER MKALQELVPN ANKTDKASML DEIIDYVKFL QLQVKVLSMS RLGGATAVGP LVASMASEGN GNGNGTSDSG NGNAANGENG
301: GGSLQVTEQQ VARLMEEDMG TAMQYLQGKG LCLMPISLAS AISSATSSSL LSRPSMGAMG GARGPLHDGG SPASPPLVNG GDDSRTIKDG GKQ

Best Arabidopsis Sequence Match ( AT5G58010.1 )
(BLAST)

001: MENGNGEGKG EFINQNNDFF LDSMSMLSSL PPCWDPSLPP PPPPPQSLFH ALAVDAPFPD QFHHPQESGG PTMGSQEGLQ PQGTVSTTSA PVVRQKPRVR
101: ARRGQATDPH SIAERLRRER IAERMKSLQE LVPNTNKTDK ASMLDEIIEY VRFLQLQVKV LSMSRLGGAG SVGPRLNGLS AEAGGRLNAL TAPCNGLNGN
201: GNATGSSNES LRSTEQRVAK LMEEDMGSAM QYLQGKGLCL MPISLATAIS SSTTHSRGSL FNPISSAVAA EDSNVTATAV AAPEASSTMD DVSASKA

Arabidopsis Description

BHLH82LRL3 [Source:UniProtKB/TrEMBL;Acc:A0A178UI77]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.