Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d045046_P001 | Maize | nucleus | 88.21 | 90.23 |
| Zm00001d037098_P003 | Maize | nucleus | 87.6 | 82.73 |
| TraesCS7D01G158300.1 | Wheat | nucleus | 68.9 | 70.62 |
| TraesCS7B01G062100.2 | Wheat | nucleus | 68.9 | 70.62 |
| TraesCS7A01G157700.1 | Wheat | nucleus | 67.89 | 69.58 |
| HORVU7Hr1G032420.3 | Barley | nucleus | 67.28 | 68.81 |
| Os06t0193400-01 | Rice | nucleus | 65.85 | 67.78 |
| GSMUA_Achr9P18080_001 | Banana | nucleus | 42.48 | 43.09 |
| GSMUA_Achr3P10120_001 | Banana | nucleus | 44.11 | 39.82 |
| Bra020398.1-P | Field mustard | nucleus | 21.95 | 38.57 |
| OQU88567 | Sorghum | nucleus | 20.93 | 37.18 |
| CDY11836 | Canola | nucleus | 21.54 | 37.06 |
| AT5G58010.1 | Thale cress | nucleus | 22.15 | 36.7 |
| KXG37359 | Sorghum | nucleus | 21.14 | 36.62 |
| KXG30460 | Sorghum | nucleus | 37.2 | 36.17 |
| CDY02785 | Canola | nucleus | 21.75 | 36.15 |
| Bra002679.1-P | Field mustard | nucleus | 21.14 | 35.99 |
| CDY55014 | Canola | nucleus | 21.14 | 35.99 |
| Bra006788.1-P | Field mustard | nucleus | 21.75 | 35.67 |
| CDX88653 | Canola | nucleus | 21.75 | 35.67 |
| CDY32733 | Canola | nucleus | 21.75 | 35.43 |
| CDY62262 | Canola | nucleus | 20.93 | 34.11 |
| VIT_11s0016g00380.t01 | Wine grape | nucleus | 35.16 | 32.28 |
| EES05953 | Sorghum | nucleus | 25.0 | 31.3 |
| OQU89497 | Sorghum | nucleus | 26.22 | 27.74 |
| EER89334 | Sorghum | nucleus | 24.8 | 27.29 |
| EES11436 | Sorghum | nucleus | 7.32 | 19.15 |
| KXG31309 | Sorghum | nucleus | 9.76 | 16.44 |
| OQU75890 | Sorghum | nucleus | 9.35 | 15.81 |
| OQU88421 | Sorghum | nucleus | 9.76 | 11.62 |
| KXG23955 | Sorghum | nucleus | 11.18 | 11.58 |
| OQU92150 | Sorghum | nucleus | 11.79 | 10.8 |
| OQU91282 | Sorghum | nucleus | 11.59 | 10.56 |
| KXG32305 | Sorghum | nucleus | 11.38 | 9.27 |
| KXG37432 | Sorghum | plastid | 8.33 | 8.51 |
| KXG21255 | Sorghum | nucleus | 11.79 | 8.43 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | EntrezGene:8065450 | UniProt:A0A194YHU5 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | EnsemblPlants:KXG19523 |
| ProteinID:KXG19523 | ProteinID:KXG19523.1 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR16223 | PANTHER:PTHR16223:SF62 |
| SMART:SM00353 | EnsemblPlantsGene:SORBI_3010G071600 | SUPFAM:SSF47459 | UniParc:UPI0007F19CC4 | InterPro:bHLH_dom | SEG:seg |
Description
hypothetical protein
Coordinates
chr10:-:5770375..5773627
Molecular Weight (calculated)
52741.9 Da
IEP (calculated)
5.043
GRAVY (calculated)
-0.311
Length
492 amino acids
Sequence
(BLAST)
(BLAST)
001: MDFSAGSYFS SWPVNSGSES YSLADGSVES YGGEGSMAPS SYFMTARSDH NLKFSVHEQD STMLPNEQLT YAGAGQTDLL PGDTLSRDKL CENLLELQRL
101: QNNSNLQSNL VAPGVLQHNS TPGVFHPQLN TPGLSELPHA LSSSIDSNGS EVSAFLADVN AVSSAPTLCS AFQNASSFME PVNLEAFSFQ GAQSDSVLNK
201: TSHSNGNISV FDSATLASLH DSKEFITGRL PSFASVKEAN LASSGFKTQK QVINEQNAMC NVPLPAFTAR NQMSVAATQG ALIPQKIPSW INENKSEGPV
301: SHPSDVQTQP NSAGNGVGVK PRVRARRGQA TDPHSIAERL RREKISDRMK SLQDLVPNSN KADKASMLDE IIDYVKFLQL QVKVLSMSRL GAPGAVLPLL
401: TESQTEGYHG QPLSAPTNTQ GLLDALDSED AFVFEEEVVK LMETSITSAM QYLQNKGLCL MPVALASAIS TQKGVSAAAI PPERRNKDML LP
101: QNNSNLQSNL VAPGVLQHNS TPGVFHPQLN TPGLSELPHA LSSSIDSNGS EVSAFLADVN AVSSAPTLCS AFQNASSFME PVNLEAFSFQ GAQSDSVLNK
201: TSHSNGNISV FDSATLASLH DSKEFITGRL PSFASVKEAN LASSGFKTQK QVINEQNAMC NVPLPAFTAR NQMSVAATQG ALIPQKIPSW INENKSEGPV
301: SHPSDVQTQP NSAGNGVGVK PRVRARRGQA TDPHSIAERL RREKISDRMK SLQDLVPNSN KADKASMLDE IIDYVKFLQL QVKVLSMSRL GAPGAVLPLL
401: TESQTEGYHG QPLSAPTNTQ GLLDALDSED AFVFEEEVVK LMETSITSAM QYLQNKGLCL MPVALASAIS TQKGVSAAAI PPERRNKDML LP
001: MMNSSLLTPS SSSSSHIQTP STTFDHEDFL DQIFSSAPWP SVVDDAHPLP SDGFHGHDVD SRNQPIMMMP LNDGSSVHAL YNGFSVAGSL PNFQIPQGSG
101: GGLMNQQGQT QTQTQPQASA STATGGTVAA PPQSRTKIRA RRGQATDPHS IAERLRRERI AERMKALQEL VPNGNKTDKA SMLDEIIDYV KFLQLQVKVL
201: SMSRLGGAAS VSSQISEAGG SHGNASSAMV GGSQTAGNSN DSVTMTEHQV AKLMEEDMGS AMQYLQGKGL CLMPISLATA ISTATCHSRN PLIPGAVADV
301: GGPSPPNLSG MTIQSTSTKM GSGNGKLNGN GVTERSSSIA VKEAVSVSKA
101: GGLMNQQGQT QTQTQPQASA STATGGTVAA PPQSRTKIRA RRGQATDPHS IAERLRRERI AERMKALQEL VPNGNKTDKA SMLDEIIDYV KFLQLQVKVL
201: SMSRLGGAAS VSSQISEAGG SHGNASSAMV GGSQTAGNSN DSVTMTEHQV AKLMEEDMGS AMQYLQGKGL CLMPISLATA ISTATCHSRN PLIPGAVADV
301: GGPSPPNLSG MTIQSTSTKM GSGNGKLNGN GVTERSSSIA VKEAVSVSKA
Arabidopsis Description
BHLH66Transcription factor bHLH66 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUG9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.