Factsheet for HORVU7Hr1G032420.3

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G158300.1	Wheat	nucleus	92.93	93.12
TraesCS7B01G062100.2	Wheat	nucleus	91.06	91.25
TraesCS7A01G157700.1	Wheat	nucleus	91.06	91.25
Os06t0193400-01	Rice	nucleus	71.31	71.76
KXG19523	Sorghum	nucleus	68.81	67.28
Zm00001d045046_P001	Maize	nucleus	66.94	66.94
Zm00001d037098_P003	Maize	nucleus	65.7	60.65
GSMUA_Achr9P18080_001	Banana	nucleus	42.62	42.27
GSMUA_Achr3P10120_001	Banana	nucleus	45.11	39.82
Bra020398.1-P	Field mustard	nucleus	21.0	36.07
CDY11836	Canola	nucleus	21.21	35.66
Bra002679.1-P	Field mustard	nucleus	21.21	35.29
CDY55014	Canola	nucleus	21.21	35.29
AT5G58010.1	Thale cress	nucleus	21.62	35.02
Bra006788.1-P	Field mustard	nucleus	21.41	34.33
CDX88653	Canola	nucleus	21.41	34.33
CDY02785	Canola	nucleus	21.0	34.12
HORVU6Hr1G085500.3	Barley	nucleus	25.36	33.7
CDY32733	Canola	nucleus	21.0	33.44
CDY62262	Canola	nucleus	21.0	33.44
HORVU5Hr1G106310.3	Barley	nucleus	21.0	32.37
VIT_11s0016g00380.t01	Wine grape	nucleus	34.51	30.97
HORVU7Hr1G030250.5	Barley	nucleus	21.21	25.82
HORVU2Hr1G104040.6	Barley	nucleus	8.32	21.28
HORVU5Hr1G065450.20	Barley	nucleus	20.37	21.03
HORVU6Hr1G088020.4	Barley	nucleus	9.98	16.22
HORVU7Hr1G026560.2	Barley	nucleus	9.56	13.61
HORVU5Hr1G011780.1	Barley	nucleus	9.56	13.49
HORVU5Hr1G102240.3	Barley	nucleus	10.81	13.13
HORVU2Hr1G060680.1	Barley	nucleus	9.56	12.71
HORVU1Hr1G017900.1	Barley	nucleus	11.43	11.16
HORVU5Hr1G093310.11	Barley	nucleus	11.43	10.05
HORVU1Hr1G054260.3	Barley	nucleus	9.36	9.7

Protein Annotations

EnsemblPlants:HORVU7Hr1G032420.3	EnsemblPlantsGene:HORVU7Hr1G032420	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom	PANTHER:PTHR16223
PANTHER:PTHR16223:SF62	PFAM:PF00010	PFscan:PS50888	SEG:seg	SMART:SM00353	SUPFAM:SSF47459
UniParc:UPI0002957D51	UniProt:M0XF36	MapMan:15.5.32	:	:	:

Description

No Description!

Coordinates

chrchr7H:-:66410505..66414390

Molecular Weight (calculated)

51477.1 Da

IEP (calculated)

4.518

GRAVY (calculated)

-0.364

Length

481 amino acids

Sequence
(BLAST)

001: MNYSDGSFFP SWPGNSASEN YSFVDGSVES YTEEGSMPTT GYFRARSNQN LTFDEHEQNP AMLANGCLPY NTQTDLLSGE ILSDDKPSNS LVELSQLQNN
101: VCLQNNLIPP GTLQCTSTPG TFDLQLDTPG LLELPHALSS SIESNGSEVS AFLADVQAVS SASTLCSTFQ NVPSYMEPVS LEAFSFQGMQ NAAMFNNASH
201: SNGNLSVFDE ATMASLHDSK EFLNGSISSL GTGQQSQLAG GGLKAEQQEQ NTMCNIPLPS FVSASQMAVS EAQGALIPSK TTSITHNNKS EYPIPISHSA
301: DVQHKANSGN GNSASAKPRA RARRGQATDP HSIAERLRRE KISERMKNLQ DLVPNSNKAD KSSMLDEIID YVKFLQLQVK VLSMSRLGAP GAVLPLLAES
401: QTEGRSNSPL SSPTTSQGLL DVAGPEDSLV FEQEVIKLME TSITNAMQYL QNKGLCLMPI ALASAISNQK GTSAAAIPPE R

Best Arabidopsis Sequence Match ( AT2G24260.1 )
(BLAST)

001: MMNSSLLTPS SSSSSHIQTP STTFDHEDFL DQIFSSAPWP SVVDDAHPLP SDGFHGHDVD SRNQPIMMMP LNDGSSVHAL YNGFSVAGSL PNFQIPQGSG
101: GGLMNQQGQT QTQTQPQASA STATGGTVAA PPQSRTKIRA RRGQATDPHS IAERLRRERI AERMKALQEL VPNGNKTDKA SMLDEIIDYV KFLQLQVKVL
201: SMSRLGGAAS VSSQISEAGG SHGNASSAMV GGSQTAGNSN DSVTMTEHQV AKLMEEDMGS AMQYLQGKGL CLMPISLATA ISTATCHSRN PLIPGAVADV
301: GGPSPPNLSG MTIQSTSTKM GSGNGKLNGN GVTERSSSIA VKEAVSVSKA

Arabidopsis Description

BHLH66Transcription factor bHLH66 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUG9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.