Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG19523 | Sorghum | nucleus | 82.73 | 87.6 |
| Zm00001d045046_P001 | Maize | nucleus | 80.23 | 86.9 |
| TraesCS7B01G062100.2 | Wheat | nucleus | 62.38 | 67.71 |
| TraesCS7D01G158300.1 | Wheat | nucleus | 62.19 | 67.5 |
| TraesCS7A01G157700.1 | Wheat | nucleus | 61.42 | 66.67 |
| HORVU7Hr1G032420.3 | Barley | nucleus | 60.65 | 65.7 |
| Os06t0193400-01 | Rice | nucleus | 60.08 | 65.48 |
| GSMUA_Achr9P18080_001 | Banana | nucleus | 39.92 | 42.89 |
| GSMUA_Achr3P10120_001 | Banana | nucleus | 41.07 | 39.27 |
| Bra020398.1-P | Field mustard | nucleus | 20.35 | 37.86 |
| CDY11836 | Canola | nucleus | 19.96 | 36.36 |
| Zm00001d013073_P002 | Maize | nucleus | 19.77 | 36.14 |
| AT5G58010.1 | Thale cress | nucleus | 20.54 | 36.03 |
| Zm00001d016873_P001 | Maize | nucleus | 33.78 | 35.99 |
| Zm00001d018967_P001 | Maize | nucleus | 19.58 | 35.79 |
| CDY55014 | Canola | nucleus | 19.77 | 35.64 |
| Bra002679.1-P | Field mustard | nucleus | 19.77 | 35.64 |
| CDY02785 | Canola | nucleus | 20.15 | 35.47 |
| CDX88653 | Canola | nucleus | 20.15 | 35.0 |
| Bra006788.1-P | Field mustard | nucleus | 20.15 | 35.0 |
| CDY32733 | Canola | nucleus | 20.15 | 34.77 |
| CDY62262 | Canola | nucleus | 19.39 | 33.44 |
| VIT_11s0016g00380.t01 | Wine grape | nucleus | 32.05 | 31.16 |
| Zm00001d020490_P001 | Maize | nucleus | 20.54 | 31.1 |
| Zm00001d018374_P001 | Maize | nucleus | 22.65 | 30.33 |
| Zm00001d005750_P002 | Maize | mitochondrion | 23.03 | 29.34 |
| Zm00001d052038_P001 | Maize | nucleus | 18.43 | 28.74 |
| Zm00001d045107_P001 | Maize | nucleus | 17.08 | 26.81 |
| Zm00001d000291_P001 | Maize | nucleus | 23.99 | 26.65 |
| Zm00001d002288_P002 | Maize | nucleus | 7.87 | 19.16 |
| Zm00001d026317_P003 | Maize | nucleus, plastid | 7.29 | 16.03 |
| Zm00001d018416_P001 | Maize | mitochondrion | 9.02 | 14.24 |
| Zm00001d045212_P001 | Maize | nucleus | 9.02 | 13.86 |
| Zm00001d031044_P001 | Maize | nucleus | 9.98 | 13.03 |
| Zm00001d029898_P001 | Maize | nucleus | 10.94 | 11.63 |
| Zm00001d034298_P001 | Maize | nucleus | 9.21 | 11.37 |
| Zm00001d013130_P001 | Maize | nucleus | 8.25 | 11.11 |
| Zm00001d024783_P001 | Maize | nucleus | 10.36 | 10.69 |
| Zm00001d033267_P001 | Maize | nucleus | 10.75 | 10.22 |
| Zm00001d040536_P005 | Maize | nucleus | 9.98 | 9.17 |
| Zm00001d008205_P001 | Maize | nucleus | 10.94 | 8.93 |
| Zm00001d029897_P001 | Maize | nucleus | 2.88 | 5.49 |
Protein Annotations
| EntrezGene:100192577 | MapMan:15.5.32 | Gene3D:4.10.280.10 | UniProt:A0A1D6LTW9 | ProteinID:AQK82843.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf |
| InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR16223 | PANTHER:PTHR16223:SF62 |
| SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI000842A9D0 | EnsemblPlantsGene:Zm00001d037098 | EnsemblPlants:Zm00001d037098_P003 | EnsemblPlants:Zm00001d037098_T003 |
| InterPro:bHLH_dom | SEG:seg | : | : | : | : |
Description
bHLH-transcription factor 5Putative HLH DNA-binding domain superfamily protein isoform 1%3B Putative HLH DNA-binding domain superfamily protein isoform 2
Coordinates
chr6:-:112038762..112044232
Molecular Weight (calculated)
56107.2 Da
IEP (calculated)
5.060
GRAVY (calculated)
-0.206
Length
521 amino acids
Sequence
(BLAST)
(BLAST)
001: MDFSAGSYFS SWPINSASES YSLADGSAES YGEGSMPPST YFMTARSDHN LNFSVHEQDS TMLPNEQLTY AGAGQIDLLP AETLSRDKLP ENLLELQGLQ
101: NISNLQSNLV APGVFQHNLT PGVFHPQLNT PGLSELPHAL SSSIDSNGSE VSAFLADLNA VSSAPTLCST FQNASSFMEP VNLEAFSIQG AQSDCVLNRT
201: SHPNGNISVC DSAALASLHD SKEFISGSLP SFASVQETNL AASGFKTQKQ EQNAVCNIPT FTARNQMSVA AMQGALVPQK IPSRINDNKS EGPVSHPSDV
301: QTQPNSAVNG VGVKPRVRAR RGQATDPHSI AERLRREKIS DRMKNLQDLV PNSNKVLFLE GGGGLTCLVH TAARKTTVLP FIKEVHLFSS LNNMEWQIFW
401: CKQADKASML DEIIDYVKFL QLQVKVLSMS RVGAPGAVLP LLTESKTEGY HGQPLPQGLL DALDSEDSFV FEEEVVKLME TSITSAMQYL QSKGLCLMPV
501: ALASAISTQK GVSAAAVPPE R
101: NISNLQSNLV APGVFQHNLT PGVFHPQLNT PGLSELPHAL SSSIDSNGSE VSAFLADLNA VSSAPTLCST FQNASSFMEP VNLEAFSIQG AQSDCVLNRT
201: SHPNGNISVC DSAALASLHD SKEFISGSLP SFASVQETNL AASGFKTQKQ EQNAVCNIPT FTARNQMSVA AMQGALVPQK IPSRINDNKS EGPVSHPSDV
301: QTQPNSAVNG VGVKPRVRAR RGQATDPHSI AERLRREKIS DRMKNLQDLV PNSNKVLFLE GGGGLTCLVH TAARKTTVLP FIKEVHLFSS LNNMEWQIFW
401: CKQADKASML DEIIDYVKFL QLQVKVLSMS RVGAPGAVLP LLTESKTEGY HGQPLPQGLL DALDSEDSFV FEEEVVKLME TSITSAMQYL QSKGLCLMPV
501: ALASAISTQK GVSAAAVPPE R
001: MNQQGQTQTQ TQPQASASTA TGGTVAAPPQ SRTKIRARRG QATDPHSIAE RLRRERIAER MKALQELVPN GNKTDKASML DEIIDYVKFL QLQVKVLSMS
101: RLGGAASVSS QISEAGGSHG NASSAMVGGS QTAGNSNDSV TMTEHQVAKL MEEDMGSAMQ YLQGKGLCLM PISLATAIST ATCHSRNPLI PGAVADVGGP
201: SPPNLSGMTI QSTSTKMGSG NGKLNGNGVT ERSSSIAVKE AVSVSKA
101: RLGGAASVSS QISEAGGSHG NASSAMVGGS QTAGNSNDSV TMTEHQVAKL MEEDMGSAMQ YLQGKGLCLM PISLATAIST ATCHSRNPLI PGAVADVGGP
201: SPPNLSGMTI QSTSTKMGSG NGKLNGNGVT ERSSSIAVKE AVSVSKA
Arabidopsis Description
BHLH66Transcription factor bHLH66 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUG9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.