Factsheet for Zm00001d000291_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d005750_P002	Maize	mitochondrion	84.65	97.07
Zm00001d020490_P001	Maize	nucleus	56.29	76.74
Zm00001d052038_P001	Maize	nucleus	36.89	51.8
Zm00001d018374_P001	Maize	nucleus	41.79	50.39
Zm00001d045107_P001	Maize	nucleus	34.54	48.8
Zm00001d018967_P001	Maize	nucleus	28.78	47.37
Zm00001d013073_P002	Maize	nucleus	28.36	46.67
Zm00001d016873_P001	Maize	nucleus	27.72	26.58
Zm00001d045046_P001	Maize	nucleus	26.65	25.99
Zm00001d037098_P003	Maize	nucleus	26.65	23.99
Zm00001d002288_P002	Maize	nucleus	10.23	22.43
Zm00001d026317_P003	Maize	nucleus, plastid	10.66	21.1
Zm00001d018416_P001	Maize	mitochondrion	11.73	16.67
Zm00001d034298_P001	Maize	nucleus	14.07	15.64
Zm00001d045212_P001	Maize	nucleus	11.09	15.34
Zm00001d013130_P001	Maize	nucleus	12.37	14.99
Zm00001d031044_P001	Maize	nucleus	12.58	14.79
Zm00001d024783_P001	Maize	nucleus	14.5	13.47
Zm00001d040536_P005	Maize	nucleus	15.78	13.05
Zm00001d029898_P001	Maize	nucleus	13.43	12.86
Zm00001d008205_P001	Maize	nucleus	16.84	12.38
Zm00001d033267_P001	Maize	nucleus	14.07	12.04
Zm00001d029897_P001	Maize	nucleus	3.2	5.49

Protein Annotations

EnsemblPlants:Zm00001d000291_P001	EnsemblPlants:Zm00001d000291_T001	EnsemblPlantsGene:Zm00001d000291	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom
PANTHER:PTHR16223	PANTHER:PTHR16223:SF28	PFAM:PF00010	PFscan:PS50888	SEG:seg	SMART:SM00353
SUPFAM:SSF47459	UniParc:UPI0008437E61	UniProt:A0A1X7YHF2	MapMan:15.5.32	:	:

Description

bHLH-transcription factor 88Transcription factor bHLH69

Coordinates

chrB73V4_ctg14:-:71867..75016

Molecular Weight (calculated)

47367.1 Da

IEP (calculated)

6.833

GRAVY (calculated)

-0.281

Length

469 amino acids

Sequence
(BLAST)

001: MQPTTREMQA MAAAGQQISL DDLRAAAGGV HDDFLDQMLG GLPPSAWPEL SSAAGGKAPD GGAQAEQMQH QPQHLGGGGG LYDDSALLAS RLRQHQISGG
101: GGGEAVKQMV LQQLADLRQE HHVLLQGMGR STSTGGSRDG GLLLPLSLGS GGSGGDVQAL LKAVADSAGG EAAGVFGGSF AGSLHHHQQQ QQHFQSHPQQ
201: QTAPLPGQGF GGGAGASGGV SQPQAGAACG GAAAPPRQRV RARRGQATDP HSIAERLRRE RIAERMKALQ ELVPNANKTD KASMLDEIVD YVKFLQLQVL
301: SMSRLGGAAA VAPLVADMSS EGRGGVAVAA GSDDGLAVTE QQVAKLMEED MGTAMQYLQG KGLCLMPVSL ASAISSATCH MRPPVGGPGL GVAAAAAHHM
401: AAMRLPPHAM NGGAGAGADA VPASPSMSVL TAQSAMAPNG AGGGTDGEGS HSQQQQRHHP KDAASVSKP

Best Arabidopsis Sequence Match ( AT2G24260.2 )
(BLAST)

001: MNQQGQTQTQ TQPQASASTA TGGTVAAPPQ SRTKIRARRG QATDPHSIAE RLRRERIAER MKALQELVPN GNKTDKASML DEIIDYVKFL QLQVKVLSMS
101: RLGGAASVSS QISEAGGSHG NASSAMVGGS QTAGNSNDSV TMTEHQVAKL MEEDMGSAMQ YLQGKGLCLM PISLATAIST ATCHSRNPLI PGAVADVGGP
201: SPPNLSGMTI QSTSTKMGSG NGKLNGNGVT ERSSSIAVKE AVSVSKA

Arabidopsis Description

BHLH66Transcription factor bHLH66 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUG9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.