Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG19523 | Sorghum | nucleus | 90.23 | 88.21 |
| Zm00001d037098_P003 | Maize | nucleus | 86.9 | 80.23 |
| TraesCS7D01G158300.1 | Wheat | nucleus | 68.4 | 68.54 |
| TraesCS7B01G062100.2 | Wheat | nucleus | 68.4 | 68.54 |
| TraesCS7A01G157700.1 | Wheat | nucleus | 67.78 | 67.92 |
| HORVU7Hr1G032420.3 | Barley | nucleus | 66.94 | 66.94 |
| Os06t0193400-01 | Rice | nucleus | 65.7 | 66.11 |
| GSMUA_Achr9P18080_001 | Banana | nucleus | 43.24 | 42.89 |
| GSMUA_Achr3P10120_001 | Banana | nucleus | 44.07 | 38.9 |
| Bra020398.1-P | Field mustard | nucleus | 21.83 | 37.5 |
| Zm00001d018967_P001 | Maize | nucleus | 21.83 | 36.84 |
| Zm00001d013073_P002 | Maize | nucleus | 21.41 | 36.14 |
| CDY11836 | Canola | nucleus | 21.41 | 36.01 |
| AT5G58010.1 | Thale cress | nucleus | 22.04 | 35.69 |
| Zm00001d016873_P001 | Maize | nucleus | 36.17 | 35.58 |
| CDY55014 | Canola | nucleus | 21.21 | 35.29 |
| Bra002679.1-P | Field mustard | nucleus | 21.21 | 35.29 |
| CDY02785 | Canola | nucleus | 21.62 | 35.14 |
| CDX88653 | Canola | nucleus | 21.62 | 34.67 |
| Bra006788.1-P | Field mustard | nucleus | 21.62 | 34.67 |
| CDY32733 | Canola | nucleus | 21.62 | 34.44 |
| CDY62262 | Canola | nucleus | 21.0 | 33.44 |
| VIT_11s0016g00380.t01 | Wine grape | nucleus | 35.55 | 31.9 |
| Zm00001d020490_P001 | Maize | nucleus | 22.25 | 31.1 |
| Zm00001d018374_P001 | Maize | nucleus | 24.12 | 29.82 |
| Zm00001d005750_P002 | Maize | mitochondrion | 24.95 | 29.34 |
| Zm00001d052038_P001 | Maize | nucleus | 19.54 | 28.14 |
| Zm00001d000291_P001 | Maize | nucleus | 25.99 | 26.65 |
| Zm00001d045107_P001 | Maize | nucleus | 18.09 | 26.2 |
| Zm00001d002288_P002 | Maize | nucleus | 8.32 | 18.69 |
| Zm00001d026317_P003 | Maize | nucleus, plastid | 7.69 | 15.61 |
| Zm00001d018416_P001 | Maize | mitochondrion | 9.36 | 13.64 |
| Zm00001d045212_P001 | Maize | nucleus | 9.56 | 13.57 |
| Zm00001d031044_P001 | Maize | nucleus | 10.6 | 12.78 |
| Zm00001d029898_P001 | Maize | nucleus | 11.85 | 11.63 |
| Zm00001d034298_P001 | Maize | nucleus | 10.19 | 11.61 |
| Zm00001d013130_P001 | Maize | nucleus | 8.94 | 11.11 |
| Zm00001d024783_P001 | Maize | nucleus | 11.02 | 10.49 |
| Zm00001d033267_P001 | Maize | nucleus | 11.23 | 9.85 |
| Zm00001d040536_P005 | Maize | nucleus | 10.81 | 9.17 |
| Zm00001d008205_P001 | Maize | nucleus | 11.85 | 8.93 |
| Zm00001d029897_P001 | Maize | nucleus | 3.33 | 5.86 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | EntrezGene:732777 | ProteinID:AQL01421.1 | UniProt:B4F8Y3 | EMBL:BT033571 |
| EMBL:BT087988 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | EMBL:KJ727690 | PFAM:PF00010 |
| PFscan:PS50888 | PANTHER:PTHR16223 | PANTHER:PTHR16223:SF62 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI00017B613F |
| EnsemblPlantsGene:Zm00001d045046 | EnsemblPlants:Zm00001d045046_P001 | EnsemblPlants:Zm00001d045046_T001 | InterPro:bHLH_dom | SEG:seg | : |
Description
bHLH-transcription factor 171 Pi starvation-induced transcription factor1
Coordinates
chr9:+:10972295..10977439
Molecular Weight (calculated)
51579.5 Da
IEP (calculated)
4.875
GRAVY (calculated)
-0.314
Length
481 amino acids
Sequence
(BLAST)
(BLAST)
001: MDFSAGSYFT SWPVNSASES YSLADGSVES YGGEGIMPPS SYFMTARSDH NLKFSVHEQD STMLPNDQLT YAGARQTDLL PGETPSRDKL CENLLELQRL
101: QNNSSLPSNL VPPGVLQHNS TPGAFHPQLN TPGLSELPHA LSSSIDSNGS EVSAFLADLN AVSSASALCS TFQNASSFME PVNLEAFSFQ GAQSDSVLNK
201: TTHPNGNISV FDSAALASLH DSKEFISGRL PSFASVQETN VAASGFKTQK QEQNAVCNVP IPTFTARNQI AVAAMPGSLI PQKIPSWINE NKSEGPVSHP
301: SDVQIQPNSV GNGVGVKPRV RARRGQATDP HSIAERLRRE KISDRMKNLQ DLVPNSNKAD KASMLDEIID HVKFLQLQVK VLSMSRLGAP GAVLPLLAES
401: QTEGYRGQLL SAPTNAQGLL DTEESEDTFA FEEEVVKLME TSITSAMQYL QNKGLCLMPV ALASAISTQK GVSAASIPPE Q
101: QNNSSLPSNL VPPGVLQHNS TPGAFHPQLN TPGLSELPHA LSSSIDSNGS EVSAFLADLN AVSSASALCS TFQNASSFME PVNLEAFSFQ GAQSDSVLNK
201: TTHPNGNISV FDSAALASLH DSKEFISGRL PSFASVQETN VAASGFKTQK QEQNAVCNVP IPTFTARNQI AVAAMPGSLI PQKIPSWINE NKSEGPVSHP
301: SDVQIQPNSV GNGVGVKPRV RARRGQATDP HSIAERLRRE KISDRMKNLQ DLVPNSNKAD KASMLDEIID HVKFLQLQVK VLSMSRLGAP GAVLPLLAES
401: QTEGYRGQLL SAPTNAQGLL DTEESEDTFA FEEEVVKLME TSITSAMQYL QNKGLCLMPV ALASAISTQK GVSAASIPPE Q
001: MMNSSLLTPS SSSSSHIQTP STTFDHEDFL DQIFSSAPWP SVVDDAHPLP SDGFHGHDVD SRNQPIMMMP LNDGSSVHAL YNGFSVAGSL PNFQIPQGSG
101: GGLMNQQGQT QTQTQPQASA STATGGTVAA PPQSRTKIRA RRGQATDPHS IAERLRRERI AERMKALQEL VPNGNKTDKA SMLDEIIDYV KFLQLQVKVL
201: SMSRLGGAAS VSSQISEAGG SHGNASSAMV GGSQTAGNSN DSVTMTEHQV AKLMEEDMGS AMQYLQGKGL CLMPISLATA ISTATCHSRN PLIPGAVADV
301: GGPSPPNLSG MTIQSTSTKM GSGNGKLNGN GVTERSSSIA VKEAVSVSKA
101: GGLMNQQGQT QTQTQPQASA STATGGTVAA PPQSRTKIRA RRGQATDPHS IAERLRRERI AERMKALQEL VPNGNKTDKA SMLDEIIDYV KFLQLQVKVL
201: SMSRLGGAAS VSSQISEAGG SHGNASSAMV GGSQTAGNSN DSVTMTEHQV AKLMEEDMGS AMQYLQGKGL CLMPISLATA ISTATCHSRN PLIPGAVADV
301: GGPSPPNLSG MTIQSTSTKM GSGNGKLNGN GVTERSSSIA VKEAVSVSKA
Arabidopsis Description
BHLH66Transcription factor bHLH66 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUG9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.