Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY55014 | Canola | nucleus | 100.0 | 100.0 |
| CDY62262 | Canola | nucleus | 96.54 | 92.38 |
| Bra020398.1-P | Field mustard | nucleus | 85.81 | 88.57 |
| Bra006788.1-P | Field mustard | nucleus | 84.78 | 81.67 |
| AT5G58010.1 | Thale cress | nucleus | 83.05 | 80.81 |
| Bra011237.1-P | Field mustard | plastid | 39.79 | 53.24 |
| Bra036256.1-P | Field mustard | nucleus | 33.22 | 42.11 |
| Bra032111.1-P | Field mustard | nucleus | 45.33 | 37.64 |
| Bra007863.1-P | Field mustard | nucleus | 43.94 | 37.57 |
| Bra018539.1-P | Field mustard | nucleus | 32.18 | 36.61 |
| Bra000872.1-P | Field mustard | nucleus | 36.68 | 34.3 |
| Bra033368.1-P | Field mustard | nucleus | 34.95 | 32.48 |
| GSMUA_Achr9P18080_001 | Banana | nucleus | 38.41 | 22.89 |
| Os06t0193400-01 | Rice | nucleus | 37.72 | 22.8 |
| Zm00001d016873_P001 | Maize | nucleus | 38.06 | 22.49 |
| Bra012133.1-P | Field mustard | nucleus, plastid | 16.26 | 21.96 |
| VIT_11s0016g00380.t01 | Wine grape | nucleus | 40.14 | 21.64 |
| TraesCS7A01G157700.1 | Wheat | nucleus | 35.64 | 21.46 |
| TraesCS7B01G062100.2 | Wheat | nucleus | 35.64 | 21.46 |
| TraesCS7D01G158300.1 | Wheat | nucleus | 35.64 | 21.46 |
| KXG30460 | Sorghum | nucleus | 37.37 | 21.34 |
| HORVU7Hr1G032420.3 | Barley | nucleus | 35.29 | 21.21 |
| Zm00001d045046_P001 | Maize | nucleus | 35.29 | 21.21 |
| KXG19523 | Sorghum | nucleus | 35.99 | 21.14 |
| GSMUA_Achr3P10120_001 | Banana | nucleus | 39.79 | 21.1 |
| Bra037312.1-P | Field mustard | nucleus | 15.22 | 21.05 |
| Os02t0564700-01 | Rice | nucleus | 36.33 | 20.04 |
| Zm00001d037098_P003 | Maize | nucleus | 35.64 | 19.77 |
| Bra011740.1-P | Field mustard | nucleus, plastid | 18.69 | 15.25 |
| Bra010591.1-P | Field mustard | nucleus, plastid | 17.99 | 15.25 |
| Bra000560.1-P | Field mustard | nucleus | 19.38 | 14.43 |
| Bra004489.1-P | Field mustard | nucleus | 17.99 | 13.0 |
| Bra000436.1-P | Field mustard | nucleus | 17.3 | 12.38 |
| Bra003483.1-P | Field mustard | nucleus | 12.8 | 12.05 |
| Bra000283.1-P | Field mustard | nucleus | 16.95 | 11.86 |
| Bra037742.1-P | Field mustard | nucleus | 16.61 | 11.82 |
| Bra007430.1-P | Field mustard | nucleus | 16.61 | 11.27 |
| Bra020017.1-P | Field mustard | nucleus | 17.99 | 10.53 |
| Bra031668.1-P | Field mustard | nucleus | 17.65 | 10.37 |
| Bra007660.1-P | Field mustard | nucleus | 12.46 | 8.53 |
| Bra011061.1-P | Field mustard | nucleus | 14.53 | 8.12 |
| Bra011062.1-P | Field mustard | cytosol | 12.46 | 7.86 |
Protein Annotations
| EnsemblPlants:Bra002679.1 | EnsemblPlants:Bra002679.1-P | EnsemblPlantsGene:Bra002679 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom |
| PANTHER:PTHR16223 | PANTHER:PTHR16223:SF28 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg | SMART:SM00353 |
| SUPFAM:SSF47459 | UniParc:UPI0002545175 | UniProt:M4CEP8 | MapMan:15.5.32 | : | : |
Description
AT5G58010 (E=3e-078) | basic helix-loop-helix (bHLH) family protein
Coordinates
chrA10:-:8283586..8284804
Molecular Weight (calculated)
30290.6 Da
IEP (calculated)
6.140
GRAVY (calculated)
-0.436
Length
289 amino acids
Sequence
(BLAST)
(BLAST)
001: MENGNGEGKG EFINQNNSDY FLDSMSMLSS LPPCWDSSLP PPHPPPPQSL LHALTESGGP SQDGLQAQGT VSTTSAPVAC QKPRVRARRG QATDPHSIAE
101: RLRRERIAER MKSLQELVPN TNKTDKASML DEIIEYVRFL QLQVKVLSVS RLGGARAAGG PGFNGLTSEV GGRLNPLSGP SNGLNGKGNG TGSSNESLRS
201: TEQRVAKLME EDMGSAMQYL QGKGLCLMPI SLATAISSTS NHSRGALFNP ISNIVAAEEA NVANASASAA AAAPEASTSM EDDVSASKA
101: RLRRERIAER MKSLQELVPN TNKTDKASML DEIIEYVRFL QLQVKVLSVS RLGGARAAGG PGFNGLTSEV GGRLNPLSGP SNGLNGKGNG TGSSNESLRS
201: TEQRVAKLME EDMGSAMQYL QGKGLCLMPI SLATAISSTS NHSRGALFNP ISNIVAAEEA NVANASASAA AAAPEASTSM EDDVSASKA
001: MENGNGEGKG EFINQNNDFF LDSMSMLSSL PPCWDPSLPP PPPPPQSLFH ALAVDAPFPD QFHHPQESGG PTMGSQEGLQ PQGTVSTTSA PVVRQKPRVR
101: ARRGQATDPH SIAERLRRER IAERMKSLQE LVPNTNKTDK ASMLDEIIEY VRFLQLQVKV LSMSRLGGAG SVGPRLNGLS AEAGGRLNAL TAPCNGLNGN
201: GNATGSSNES LRSTEQRVAK LMEEDMGSAM QYLQGKGLCL MPISLATAIS SSTTHSRGSL FNPISSAVAA EDSNVTATAV AAPEASSTMD DVSASKA
101: ARRGQATDPH SIAERLRRER IAERMKSLQE LVPNTNKTDK ASMLDEIIEY VRFLQLQVKV LSMSRLGGAG SVGPRLNGLS AEAGGRLNAL TAPCNGLNGN
201: GNATGSSNES LRSTEQRVAK LMEEDMGSAM QYLQGKGLCL MPISLATAIS SSTTHSRGSL FNPISSAVAA EDSNVTATAV AAPEASSTMD DVSASKA
Arabidopsis Description
BHLH82LRL3 [Source:UniProtKB/TrEMBL;Acc:A0A178UI77]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.