Factsheet for TraesCS7A01G157700.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G158300.1	Wheat	nucleus	96.88	96.88
TraesCS7B01G062100.2	Wheat	nucleus	95.0	95.0
HORVU7Hr1G032420.3	Barley	nucleus	91.25	91.06
Os06t0193400-01	Rice	nucleus	72.5	72.8
KXG19523	Sorghum	nucleus	69.58	67.89
Zm00001d045046_P001	Maize	nucleus	67.92	67.78
Zm00001d037098_P003	Maize	nucleus	66.67	61.42
GSMUA_Achr9P18080_001	Banana	nucleus	43.75	43.3
GSMUA_Achr3P10120_001	Banana	nucleus	45.42	40.0
Bra020398.1-P	Field mustard	nucleus	21.46	36.79
CDY11836	Canola	nucleus	21.46	36.01
TraesCS5A01G441900.1	Wheat	nucleus	21.04	35.94
AT5G58010.1	Thale cress	nucleus	22.08	35.69
Bra002679.1-P	Field mustard	nucleus	21.46	35.64
CDY55014	Canola	nucleus	21.46	35.64
CDY02785	Canola	nucleus	21.46	34.8
Bra006788.1-P	Field mustard	nucleus	21.67	34.67
CDX88653	Canola	nucleus	21.67	34.67
CDY32733	Canola	nucleus	21.46	34.11
CDY62262	Canola	nucleus	21.25	33.77
TraesCS7A01G147500.1	Wheat	nucleus	27.71	33.42
TraesCS6A01G358400.3	Wheat	nucleus	26.04	32.22
VIT_11s0016g00380.t01	Wine grape	nucleus	35.21	31.53
TraesCS5A01G225700.1	Wheat	nucleus	26.67	27.95
TraesCS6A01G190600.1	Wheat	nucleus	7.08	26.36
TraesCS2A01G461700.2	Wheat	nucleus	8.33	21.28
TraesCS6A01G373500.2	Wheat	nucleus	9.79	15.51
TraesCS5A01G049600.1	Wheat	nucleus	10.21	14.58
TraesCS7A01G126900.1	Wheat	nucleus	9.58	13.9
TraesCS5A01G420200.1	Wheat	nucleus	11.25	12.86
TraesCS2A01G253900.2	Wheat	nucleus	9.58	12.85
TraesCS5A01G376500.1	Wheat	nucleus	11.46	11.29
TraesCS1A01G083000.1	Wheat	nucleus	11.88	11.24
TraesCS1A01G212700.1	Wheat	nucleus	9.58	10.11

Protein Annotations

EnsemblPlants:TraesCS7A01G157700.1	EnsemblPlantsGene:TraesCS7A01G157700	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom	PANTHER:PTHR16223
PANTHER:PTHR16223:SF62	PFAM:PF00010	PFscan:PS50888	SEG:seg	SMART:SM00353	SUPFAM:SSF47459
TIGR:cd00083	MapMan:15.5.32	:	:	:	:

Description

No Description!

Coordinates

chr7A:-:110851569..110854670

Molecular Weight (calculated)

51237.7 Da

IEP (calculated)

4.534

GRAVY (calculated)

-0.360

Length

480 amino acids

Sequence
(BLAST)

001: MDYSNGSFFP SWPDNSASEN YSFVDGSVES YAEEGSMPPA GYFRARSNQN LTFDEHEQNP AMLANGCLPY NTQTDLLSGE ILSENKPSNS LMELPQLQNN
101: GSLQSNLIPS GTLHCTSTPG TFDLQLDTPG LLELPHALSS SIESNGSEVS AFLADVHAVS SASTLCSTFQ NVPSYMEPVS LEAFSFQGIQ NAAMFNNTSH
201: SNGNLSVFDE ATMASLHDSK EFLSGGISSF GTAEQSQLAG SGLKAEQQEQ NVMCNIPLPF ASGSQMAVSE AQGTLIPSKI SSTIHNNKSE YPVPISHSAD
301: AQNKANSANG NSASAKPRAR ARRGQATDPH SIAERLRREK ISERMKNLQD LVPNSNKADK SSMLDEIIDY VKFLQLQVKV LSMSRLGAPG AVLPLLAESQ
401: TEGHSNSSLS PPTASQGLLD AAGPEDSLVF EQEVIKLMET SITNAMQYLQ NKGLCLMPIA LASAISNQKG TSAAAVPPER

Best Arabidopsis Sequence Match ( AT2G24260.1 )
(BLAST)

001: MMNSSLLTPS SSSSSHIQTP STTFDHEDFL DQIFSSAPWP SVVDDAHPLP SDGFHGHDVD SRNQPIMMMP LNDGSSVHAL YNGFSVAGSL PNFQIPQGSG
101: GGLMNQQGQT QTQTQPQASA STATGGTVAA PPQSRTKIRA RRGQATDPHS IAERLRRERI AERMKALQEL VPNGNKTDKA SMLDEIIDYV KFLQLQVKVL
201: SMSRLGGAAS VSSQISEAGG SHGNASSAMV GGSQTAGNSN DSVTMTEHQV AKLMEEDMGS AMQYLQGKGL CLMPISLATA ISTATCHSRN PLIPGAVADV
301: GGPSPPNLSG MTIQSTSTKM GSGNGKLNGN GVTERSSSIA VKEAVSVSKA

Arabidopsis Description

BHLH66Transcription factor bHLH66 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUG9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.