Factsheet for TraesCS7A01G147500.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G149400.1	Wheat	nucleus	97.49	97.0
Os06t0184000-00	Rice	nucleus	71.86	71.86
EER89334	Sorghum	nucleus	72.86	64.88
KRH72281	Soybean	nucleus, plastid	19.35	61.6
TraesCS6A01G358400.3	Wheat	nucleus	50.75	52.06
CDY20290	Canola	endoplasmic reticulum, extracellular	24.37	47.78
CDY46132	Canola	endoplasmic reticulum	20.6	46.59
TraesCS5A01G225700.1	Wheat	nucleus	51.01	44.32
TraesCS5A01G441900.1	Wheat	nucleus	30.4	43.06
CDY46133	Canola	nucleus	17.59	36.65
TraesCS6A01G190600.1	Wheat	nucleus	9.55	29.46
TraesCS7A01G157700.1	Wheat	nucleus	33.42	27.71
TraesCS2A01G461700.2	Wheat	nucleus	11.56	24.47
TraesCS6A01G373500.2	Wheat	nucleus	13.57	17.82
TraesCS5A01G049600.1	Wheat	nucleus	14.57	17.26
TraesCS7A01G126900.1	Wheat	nucleus	13.82	16.62
TraesCS2A01G253900.2	Wheat	nucleus	14.57	16.2
TraesCS5A01G420200.1	Wheat	nucleus	16.08	15.24
TraesCS5A01G376500.1	Wheat	nucleus	17.84	14.58
TraesCS1A01G083000.1	Wheat	nucleus	16.33	12.82
TraesCS1A01G212700.1	Wheat	nucleus	13.82	12.09

Protein Annotations

EnsemblPlants:TraesCS7A01G147500.1	EnsemblPlantsGene:TraesCS7A01G147500	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom	PANTHER:PTHR16223
PANTHER:PTHR16223:SF28	PFAM:PF00010	PFscan:PS50888	SEG:seg	SMART:SM00353	SUPFAM:SSF47459
TIGR:cd00083	MapMan:15.5.32	:	:	:	:

Description

No Description!

Coordinates

chr7A:-:100623267..100625744

Molecular Weight (calculated)

39492.4 Da

IEP (calculated)

6.693

GRAVY (calculated)

-0.295

Length

398 amino acids

Sequence
(BLAST)

001: MAGGDGGGGG GAQDDFFDQM LSTLPSAWGD LGAGGKSPWE IAAGAEDLGA FDESTLLASR LRQHQIGGEK PVMLQLTDLQ RQGLGGEESG GTGFSPLPLF
101: ADRSPPQSRE EMDGGFKSPN GTGGDHALFN GFGVHGGGTA VQPPFGQGGS MSGQSFGGGP AASGGTTAPA SSGGGAAPPR QTRVRARRGQ ATDPHSIAER
201: LRRERIAERM KSLQELVPNA NKTDKASMLD EIIDYVKFLQ LQVKVLSMSR LGGAAGMAPL VASMSSEANS SAKSSNGGGN SAAAAAAKAN GGGENGGGGG
301: GGGGLRVTEH QVAKMMEEDM GTAMQYLQGK GLCLMPISLA SAISSATTTT TSPASLLARQ AVRPAAAAAA LASANGGGDA AAVRPVKVDA GAASGGKP

Best Arabidopsis Sequence Match ( AT2G24260.1 )
(BLAST)

001: MMNSSLLTPS SSSSSHIQTP STTFDHEDFL DQIFSSAPWP SVVDDAHPLP SDGFHGHDVD SRNQPIMMMP LNDGSSVHAL YNGFSVAGSL PNFQIPQGSG
101: GGLMNQQGQT QTQTQPQASA STATGGTVAA PPQSRTKIRA RRGQATDPHS IAERLRRERI AERMKALQEL VPNGNKTDKA SMLDEIIDYV KFLQLQVKVL
201: SMSRLGGAAS VSSQISEAGG SHGNASSAMV GGSQTAGNSN DSVTMTEHQV AKLMEEDMGS AMQYLQGKGL CLMPISLATA ISTATCHSRN PLIPGAVADV
301: GGPSPPNLSG MTIQSTSTKM GSGNGKLNGN GVTERSSSIA VKEAVSVSKA

Arabidopsis Description

BHLH66Transcription factor bHLH66 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUG9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.